RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 MARC2Q969Z3 335 aa9.15□□□□□ -0.94
TRAPPC9-204ENST00000518723 ADTRPQ96IZ2 230 aa9.15□□□□□ -0.94
TRAPPC9-204ENST00000518723 CCDC140Q96MF4 163 aa9.15□□□□□ -0.94
TRAPPC9-204ENST00000518723 URM1Q9BTM9 101 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-204ENST00000518723 KCNK15Q9H427 330 aa9.15□□□□□ -0.94
TRAPPC9-204ENST00000518723 SELENOKQ9Y6D0 94 aa9.15□□□□□ -0.94
TRAPPC9-204ENST00000518723 ZNF320A2RRD8 509 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 ATP5HO75947 161 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 ACTL6BO94805 426 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 DIRAS3O95661 229 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 CRYZL1O95825 349 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 SAA1P0DJI8 122 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 C8orf88P0DMB2 117 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 ARL3P36405 182 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 TMEM50BP56557 158 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 CDK10Q15131 360 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 KLK9Q2XQG4 91 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 MMD2Q8IY49 270 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 OR2C3Q8N628 320 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 STPG3Q8N7X2 389 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 CMSS1Q9BQ75 279 aaKnown RBP9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 CABLES2Q9BTV7 478 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 FBXL7Q9UJT9 491 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 KLK9Q9UKQ9 250 aa9.14□□□□□ -0.95
TRAPPC9-204ENST00000518723 EFCAB10A6NFE3 127 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 NPIPB5A8MRT5 1133 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 TEX22C9J3V5 150 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 FABP7O15540 132 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 DUTP33316 252 aaKnown RBP9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 TCTAP57738 103 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 C10orf55Q5SWW7 151 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 CLEC19AQ6UXS0 136 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 RBPMS2Q6ZRY4 209 aaKnown RBP9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 CEACAM19Q7Z692 300 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 SLC38A6Q8IZM9 456 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 OR6M1Q8NGM8 313 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 FANCD2OSQ96PS1 177 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 SPAG8Q99932 426 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 DNAH11Q96DT5 4516 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
TRAPPC9-204ENST00000518723 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 TRBV6-7A0A0A0MS04 114 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 LINC00473A8K010 186 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 BET1O15155 118 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 IGHV3-23P01764 117 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 CD3GP09693 182 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 MED14OSP0DP75 135 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 GALP22466 123 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 ST3GAL4Q11206 333 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 INSL4Q14641 139 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 ACSM3Q53FZ2 586 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 IGSF11Q5DX21 431 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 RBM48Q5RL73 367 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 LINC00336Q6ZUF6 198 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 ZNF555Q8NEP9 628 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 OR10J5Q8NHC4 309 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 FBLIM1Q8WUP2 373 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 EEF1AKMT3Q96AZ1 226 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 ARHGAP5-AS1Q96IT6 56 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 PECRQ9BY49 303 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 MFFQ9GZY8 342 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 C5orf66Q9H5L9 145 aa9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 MRPL27Q9P0M9 148 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-204ENST00000518723 HMX3A6NHT5 357 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 TSPAN4O14817 238 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 CRYGCP07315 174 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 PSMB6P28072 239 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 ELLP55199 621 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 WNT4P56705 351 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 ODF3L2Q3SX64 289 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 UNQ9165/PRO28630Q6UXU0 137 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 C19orf35Q6ZS72 473 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 MS4A15Q8N5U1 240 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 SETD9Q8NE22 299 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 FYTTD1Q96QD9 318 aaKnown RBP9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 MAP6D1Q9H9H5 199 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 SLC2A9Q9NRM0 540 aa9.11□□□□□ -0.95
TRAPPC9-204ENST00000518723 TRBV7-1A0A0A6YYK4 115 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 DPPA5A6NC42 116 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 DHFRP00374 187 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 CDK1P06493 297 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 IL6RP08887 468 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 CTRB1P17538 263 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 RBMS2Q15434 407 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 ZNF585BQ52M93 769 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 PLAC9Q5JTB6 97 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 CTRB2Q6GPI1 263 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 GALNT14Q96FL9 552 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 OR51E2Q9H255 320 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 C11orf68Q9H3H3 251 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 SMPD3Q9NY59 655 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 UBQLN2Q9UHD9 624 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 UFC1Q9Y3C8 167 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 RBM7Q9Y580 266 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 S4R3C0 116 aa9.1□□□□□ -0.95
TRAPPC9-204ENST00000518723 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
TRAPPC9-204ENST00000518723 A0A1B0GW64 132 aa9.09□□□□□ -0.95
TRAPPC9-204ENST00000518723 E7EUB6 86 aa9.09□□□□□ -0.95
TRAPPC9-204ENST00000518723 SLC17A2O00624 439 aa9.09□□□□□ -0.95
TRAPPC9-204ENST00000518723 MYL12BO14950 172 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms