RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 M0QZK8 103 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 PEX7O00628 323 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 XKRYO14609 159 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 CST4P01036 141 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 RD3LP0DJH9 198 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 RAB5AP20339 215 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 BGNP21810 368 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 CTRLP40313 264 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 CDKN2BP42772 138 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 HCCSP53701 268 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 OR2B6P58173 313 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 ZNF121P58317 390 aaPredicted RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 PSPHP78330 225 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 PRR3P79522 188 aaKnown RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 C2orf80Q0P641 193 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 DYNC1I2Q13409 638 aaKnown RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 PRPSAP1Q14558 356 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 PAFAH1B3Q15102 231 aaKnown RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 VAMP3Q15836 100 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 UAP1Q16222 522 aaPredicted RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 ACSBG2Q5FVE4 666 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 COA6Q5JTJ3 125 aaKnown RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 HHATQ5VTY9 493 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 OR2T5Q6IEZ7 315 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 C8orf74Q6P047 294 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 C3orf33Q6P1S2 294 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 FAM173BQ6P4H8 233 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 FBXW12Q6X9E4 464 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 Q6ZRN7 208 aaPredicted RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 Q6ZSA8 131 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 SLC35E3Q7Z769 313 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 C11orf72Q8NBR9 251 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 SLC30A7Q8NEW0 376 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 NPBQ8NG41 125 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 OR2T29Q8NH02 315 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 OR11H2Q8NH07 326 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 OR4S2Q8NH73 311 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 OR4A5Q8NH83 315 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 LGALS14Q8TCE9 139 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 KLF14Q8TD94 323 aaPredicted RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 ACTRT1Q8TDG2 376 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 ADTRPQ96IZ2 230 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 OR2M2Q96R28 347 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 HDHD3Q9BSH5 251 aaPredicted RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 ULBP2Q9BZM5 246 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 SLIRPQ9GZT3 109 aaKnown RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 VCX3AQ9NNX9 186 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 RPS10P5Q9NQ39 176 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 NLE1Q9NVX2 485 aaPredicted RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 RMND1Q9NWS8 449 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 STX18Q9P2W9 335 aaKnown RBP2.07□□□□□ -2.08
CPNE3-204ENST00000517862 UVRAGQ9P2Y5 699 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 FBXL3Q9UKT7 428 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 CES1P1Q9UKY3 287 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 PSG8Q9UQ74 426 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 KLF12Q9Y4X4 402 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 OR51B2Q9Y5P1 312 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 A0A0B4J2E0 115 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 M0R2T5 61 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 NDUFA2O43678 99 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 IGLV2-23P01705 113 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 GYPAP02724 150 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 BGLAPP02818 100 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 CD3GP09693 182 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 RBM34P42696 430 aaKnown RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 SSR2P43308 183 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 RANBP1P43487 201 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 GALR1P47211 349 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 OR12D2P58182 307 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 TAS2R46P59540 309 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 DAZ2Q13117 558 aaKnown RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 OR8B8Q15620 311 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 PSG3Q16557 428 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 POU2AF1Q16633 256 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 ZNF181Q2M3W8 571 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 RSPO1Q2MKA7 263 aaPredicted RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 CEACAM16Q2WEN9 425 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 IBA57Q5T440 356 aaKnown RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 METTL21CQ5VZV1 264 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 FAHD1Q6P587 224 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 ZNF773Q6PK81 442 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 EPGNQ6UW88 154 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 SLC16A13Q7RTY0 426 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 PEX26Q7Z412 305 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 PHF13Q86YI8 300 aaPredicted RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 ZNF584Q8IVC4 421 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 NKAIN4Q8IVV8 208 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 ZIC4Q8N9L1 334 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 CDRT4Q8N9R6 151 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 OR10G9Q8NGN4 311 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 OR6K6Q8NGW6 343 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 OR6N2Q8NGY6 317 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 SLC25A40Q8TBP6 338 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 TMEM234Q8WY98 164 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 H1FXQ92522 213 aaKnown RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 CCDC124Q96CT7 223 aaKnown RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 RNF185Q96GF1 192 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms