RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 KISS1Q15726 138 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 UBE2V2Q15819 145 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 PNLIPRP3Q17RR3 467 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 GFOD2Q3B7J2 385 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 SMIM21Q3B7S5 101 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 PAN3Q58A45 887 aaKnown RBP2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 SPIN3Q5JUX0 258 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM69Q5SWH9 247 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM268Q5VZI3 342 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 PLCXD3Q63HM9 321 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 CDPF1Q6NVV7 123 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 LPCAT3Q6P1A2 487 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 IL34Q6ZMJ4 242 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF841Q6ZN19 808 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ACOT7LQ6ZUV0 252 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 LINC00596Q86U02 117 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF546Q86UE3 836 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 MOGAT3Q86VF5 341 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ANGPTL5Q86XS5 388 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ZFP82Q8N141 532 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF561Q8N587 486 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 GCSAMQ8N6F7 178 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 NKAIN3Q8N8D7 197 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM229BQ8NBD8 167 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 CHST4Q8NCG5 386 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 OR5AP2Q8NGF4 316 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 OR4X2Q8NGF9 303 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 OR8B3Q8NGG8 313 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 OR51S1Q8NGJ8 323 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 OR5D13Q8NGL4 314 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 OR13C3Q8NGS6 347 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 OR10AC1Q8NH08 325 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 NUDCD2Q8WVJ2 157 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 HPSE2Q8WWQ2 592 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ARL11Q969Q4 196 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM106AQ96A25 262 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 MALSU1Q96EH3 234 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ADAT3Q96EY9 351 aaPredicted RBP2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 BORCS8Q96FH0 119 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 NEIL1Q96FI4 390 aaPredicted RBP2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 SDSLQ96GA7 329 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 CCDC140Q96MF4 163 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 OR8B2Q96RD0 313 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 RNF126Q9BV68 326 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 SEC11CQ9BY50 192 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 TUBA4BQ9H853 241 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 C1orf123Q9NWV4 160 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC2A8Q9NY64 477 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 TAS2R3Q9NYW6 316 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 IL36GQ9NZH8 169 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 MBD2Q9UBB5 411 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF107Q9UII5 783 aaPredicted RBP2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 ANAPC10Q9UM13 185 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 GTF2A1LQ9UNN4 478 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 V9GY05 133 aa2.4□□□□□ -2.03
SCARNA13-201ENST00000516672 IGKV1-9A0A0C4DH69 117 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 hCG_1809904A0A1W2PP81 198 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A1W2PPE2 198 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A1W2PPH5 198 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM230AA0A1W2PPH8 454 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 KANTRA0A1W2PQU2 76 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A1W2PR64 198 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A1W2PRV1 198 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 MEIS3P1A6NDR6 274 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A10PA6NDY2 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A18PA6NE21 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A16PA6NEW6 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 MSGN1A6NI15 193 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A20PA6NIJ5 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A8PA6NJQ4 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A7PA6NKC0 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 A6NLC8 198 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF729A6NN14 1252 aaPredicted RBP2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 OR2AT4A6NND4 320 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 CEACAM18A8MTB9 384 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A22PA8MWA6 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A12PA8MX19 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A5PA8MXJ8 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A23PA8MXZ1 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 M0QYG6 137 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC17A2O00624 439 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 SH2D1BO14796 132 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 NDUFB3O43676 98 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 ENSAO43768 121 aaKnown RBP2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 SSX5O60225 188 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 CA11O75493 328 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 NXPH2O95156 264 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 HTR3BO95264 441 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 BPNT1O95861 308 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 RBP4P02753 201 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 CD3DP04234 171 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 RLN1P04808 185 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 CSN2P05814 226 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FCGR3AP08637 254 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 OR4E1P0C645 316 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A15PP0C7V4 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A13PP0C7W8 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A14PP0C7W9 464 aa2.39□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM90A24PP0C7X0 464 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms