RNA–Protein interactions for RNA: ENST00000516546.1

RN7SKP287-201, Transcript of RNA, 7SK small nuclear pseudogene 287, humanhuman

BASIC

Gene RN7SKP287, Length 266 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP287-201ENST00000516546 CHD7Q9P2D1 2997 aa0.08□□□□□ -2.4
RN7SKP287-201ENST00000516546 LAMA4Q16363 1823 aa0.08□□□□□ -2.4
RN7SKP287-201ENST00000516546 FREM2Q5SZK8 3169 aa0.08□□□□□ -2.4
RN7SKP287-201ENST00000516546 HUWE1Q7Z6Z7 4374 aaKnown RBP0.08□□□□□ -2.4
RN7SKP287-201ENST00000516546 CFAP46Q8IYW2 2715 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 TACC2O95359 2948 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 KALRNO60229 2985 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 FAT1Q14517 4588 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 NPATQ14207 1427 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 GCN1Q92616 2671 aaKnown RBP0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 RANBP2P49792 3224 aaKnown RBP0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 PKD1P98161 4303 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 BIRC6Q9NR09 4857 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 ANK2Q01484 3957 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 ITPR2Q14571 2701 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 TRAV7A0A075B6U4 112 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 A0A087WUU8 490 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 LDOC1O95751 146 aaPredicted RBP0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 ASS1P00966 412 aaKnown RBP0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 CSTAP01040 98 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 HBZP02008 142 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 LIMS3P0CW19 117 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 LIMS4P0CW20 117 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 ADORA1P30542 326 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 CRATP43155 626 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 ETV1P50549 477 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 PSMD7P51665 324 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 DAD1P61803 113 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 C10orf55Q5SWW7 151 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 C1orf174Q8IYL3 243 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 LRRC39Q96DD0 335 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 VPS13DQ5THJ4 4388 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 SYNE1Q8NF91 8797 aaKnown RBP0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 FRAS1Q86XX4 4008 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 LRP1BQ9NZR2 4599 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 POLQO75417 2590 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 CSMD1Q96PZ7 3565 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 MXRA5Q9NR99 2828 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 BOD1L1Q8NFC6 3051 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 GOLGB1Q14789 3259 aaKnown RBP0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 HERC2O95714 4834 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 MYO9AB2RTY4 2548 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 MYO15AQ9UKN7 3530 aa0.07□□□□□ -2.4
RN7SKP287-201ENST00000516546 KMT2AQ03164 3969 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 ANK3Q12955 4377 aaKnown RBP0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 KIAA1109Q2LD37 5005 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 CEP295Q9C0D2 2601 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 LPAP08519 4548 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 ANKRD11Q6UB99 2663 aaPredicted RBP0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 ZFYVE26Q68DK2 2539 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 SCAF11Q99590 1463 aaKnown RBP0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 A0A0J9YW62 118 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 LGALS1P09382 135 aaKnown RBP0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 FXYD7P58549 80 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 TMEM86AQ8N2M4 240 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 FAM210AQ96ND0 272 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 NMNAT3Q96T66 252 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 PRRG3Q9BZD7 231 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 CUBNO60494 3623 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 UNC80Q8N2C7 3258 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 CSMD3Q7Z407 3707 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 PRUNE2Q8WUY3 3088 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 MYCBP2O75592 4640 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 RYR3Q15413 4870 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 CELSR3Q9NYQ7 3312 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 PKHD1L1Q86WI1 4243 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 NBPF19A0A087WUL8 3843 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 STARD9Q9P2P6 4700 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 WDFY4Q6ZS81 3184 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 CHD2O14647 1828 aaKnown RBP0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 PIEZO1Q92508 2521 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 HSPG2P98160 4391 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 LOC400499M0QZD8 3231 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 HMCN2Q8NDA2 5059 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 DNAH5Q8TE73 4624 aa0.06□□□□□ -2.4
RN7SKP287-201ENST00000516546 SMARCA4P51532 1647 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 DCHS1Q96JQ0 3298 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 USP9YO00507 2555 aaPredicted RBP0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 EPG5Q9HCE0 2579 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 ATRQ13535 2644 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 VCANP13611 3396 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 PRKDCP78527 4128 aaKnown RBP0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 AKAP9Q99996 3911 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 LRP2P98164 4655 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 MKI67P46013 3256 aaKnown RBP0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 FASNP49327 2511 aaKnown RBP0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 ZNF462Q96JM2 2506 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 SGCEO43556 437 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 CREBL2O60519 120 aaPredicted RBP0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 CST4P01036 141 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 ALDH3A1P30838 453 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 TAS2R20P59543 309 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 TMEM267Q0VDI3 215 aaPredicted RBP0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 TMEM249Q2WGJ8 235 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 SPATA8Q6RVD6 105 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 BAP18Q8IXM2 172 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 UMODL1-AS1Q8N2C9 162 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 TMEM56Q96MV1 263 aa0.05□□□□□ -2.4
RN7SKP287-201ENST00000516546 GMEB1Q9Y692 573 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms