RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 GZMHP20718 246 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCL1P22362 96 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 EVI2AP22794 236 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST1H2BOP23527 126 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 S100PP25815 95 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 BLVRBP30043 206 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SRIP30626 198 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST1H2BBP33778 126 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GLRXP35754 106 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 NUDT1P36639 197 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PPP1CCP36873 323 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OPRK1P41145 380 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD200P41217 278 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCR2P41597 374 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CXCL5P42830 114 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CA7P43166 264 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LPAR6P43657 344 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 UBE2AP49459 152 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LHX2P50458 406 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCR6P51684 374 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 POLR2HP52434 150 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF136P52737 540 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 AKR1C2P52895 323 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 EMP1P54849 157 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 AQP4P55087 323 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST1H2BDP58876 126 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TAS2R45P59539 299 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DNAJB13P59910 316 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TPI1P60174 286 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RPS20P60866 119 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CKS1BP61024 79 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FGF12P61328 243 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 NCS1P62166 190 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST1H2BCP62807 126 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FKBP1AP62942 108 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HERVK_113P63121 156 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GNG5P63218 68 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MRPS10P82664 201 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TNFAIP6P98066 277 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CDK5Q00535 292 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PSG9Q00887 426 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DEFA6Q01524 100 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 EMX2Q04743 252 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 REG3AQ06141 175 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LOXL1Q08397 574 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DAZ2Q13117 558 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 BTN1A1Q13410 526 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HTR4Q13639 388 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ENDOGQ14249 297 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RHEBQ15382 184 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR8B8Q15620 311 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LPAL2Q16609 132 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 UBE2SQ16763 222 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST2H2BEQ16778 126 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 Q1RN00 199 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ABCA11PQ4W5N1 156 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TNFAIP8L3Q5GJ75 292 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM78AQ5JUQ0 283 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM69Q5SWH9 247 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MRPL2Q5T653 305 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LYRM7Q5U5X0 104 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM104BQ5XKR9 115 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 EBLN2Q6P2I7 272 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRSS54Q6PEW0 395 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 WDR59Q6PJI9 974 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CEMP1Q6PRD7 247 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 Q6Q795 121 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 AGTRAPQ6RW13 159 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGFL3Q6UXB1 125 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IL34Q6ZMJ4 242 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TIFABQ6ZNK6 161 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C3orf62Q6ZUJ4 267 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM19A3Q7Z5A8 133 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DAZ4Q86SG3 579 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRNTQ86SH4 94 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 KTN1-AS1Q86SY8 53 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CROCCP2Q86T23 111 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF429Q86V71 674 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC25A42Q86VD7 318 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PDPNQ86YL7 162 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRR15Q8IV56 129 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PCP2Q8IVA1 136 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SGPP2Q8IWX5 399 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 BAP18Q8IXM2 172 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MKXQ8IYA7 352 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C1orf174Q8IYL3 243 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR8I2Q8N0Y5 310 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM256Q8N2U0 113 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 Q8N377 158 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF664Q8N3J9 261 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LRRC18Q8N456 261 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LINC00612Q8N6U2 182 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF283Q8N7M2 679 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 POM121L12Q8N7R1 296 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC25A29Q8N8R3 303 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZDHHC22Q8N966 263 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 Q8N976 141 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FER1L6-AS1Q8NA97 138 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C20orf203Q8NBC4 194 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms