RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 OR5AN1Q8NGI8 311 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 MRPL20Q9BYC9 149 aaKnown RBP16.39■□□□□ 0.21
TRIO-223ENST00000515710 PSENENQ9NZ42 101 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 OR9G9P0C7N8 305 aa16.38■□□□□ 0.21
TRIO-223ENST00000515710 CLEC9AQ6UXN8 241 aa16.38■□□□□ 0.21
TRIO-223ENST00000515710 OR4A16Q8NH70 328 aa16.38■□□□□ 0.21
TRIO-223ENST00000515710 BSCL2Q96G97 398 aaPredicted RBP16.38■□□□□ 0.21
TRIO-223ENST00000515710 NABP2Q9BQ15 211 aa16.38■□□□□ 0.21
TRIO-223ENST00000515710 PCGF1Q9BSM1 259 aa16.38■□□□□ 0.21
TRIO-223ENST00000515710 SMIM3Q9BZL3 60 aa16.38■□□□□ 0.21
TRIO-223ENST00000515710 SLC25A32Q9H2D1 315 aa16.38■□□□□ 0.21
TRIO-223ENST00000515710 RBKSQ9H477 322 aa16.38■□□□□ 0.21
TRIO-223ENST00000515710 BORCS7-ASMTA0A0B4J1R7 106 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 TXNL1O43396 289 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 RBMXL2O75526 392 aaKnown RBP16.37■□□□□ 0.21
TRIO-223ENST00000515710 IGLV1-47P01700 117 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 HLA-DRB5Q30154 266 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 SSX9Q7RTT3 188 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 ZNF295-AS1Q8N0V1 137 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 UBAC2Q8NBM4 344 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 CLRN3Q8NCR9 226 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 OR13D1Q8NGV5 346 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 TMEM140Q9NV12 185 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 H0YJW9 148 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 IAPPP10997 89 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 EIF5AL1Q6IS14 154 aaKnown RBP16.37■□□□□ 0.21
TRIO-223ENST00000515710 C1orf122Q6ZSJ8 110 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 TGIF2LXQ8IUE1 241 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 OR52E5Q8NH55 327 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 RHOVQ96L33 236 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 BPESC1Q9GZL8 116 aa16.37■□□□□ 0.21
TRIO-223ENST00000515710 BARX1Q9HBU1 254 aaPredicted RBP16.37■□□□□ 0.21
TRIO-223ENST00000515710 LY86O95711 162 aa16.36■□□□□ 0.21
TRIO-223ENST00000515710 H2AFB1P0C5Y9 115 aa16.36■□□□□ 0.21
TRIO-223ENST00000515710 STX12Q86Y82 276 aa16.36■□□□□ 0.21
TRIO-223ENST00000515710 KIR3DL3Q8N743 410 aa16.36■□□□□ 0.21
TRIO-223ENST00000515710 Q8N7P7 452 aa16.36■□□□□ 0.21
TRIO-223ENST00000515710 OSR1Q8TAX0 266 aaPredicted RBP16.36■□□□□ 0.21
TRIO-223ENST00000515710 CIB3Q96Q77 187 aaPredicted RBP16.36■□□□□ 0.21
TRIO-223ENST00000515710 WFDC1Q9HC57 220 aa16.36■□□□□ 0.21
TRIO-223ENST00000515710 AMMECR1Q9Y4X0 333 aaPredicted RBP16.36■□□□□ 0.21
TRIO-223ENST00000515710 HOXA1P49639 335 aaPredicted RBP16.35■□□□□ 0.21
TRIO-223ENST00000515710 ARF6P62330 175 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 RELBQ01201 579 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 USF3Q68DE3 2245 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 ENSAO43768 121 aaKnown RBP16.35■□□□□ 0.21
TRIO-223ENST00000515710 MC5RP33032 325 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 SULT1A1P50225 295 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 TMEM177Q53S58 311 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 ZNF429Q86V71 674 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 PDPNQ86YL7 162 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 VKORC1L1Q8N0U8 176 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 QTRT1Q9BXR0 403 aaKnown RBP16.35■□□□□ 0.21
TRIO-223ENST00000515710 ARV1Q9H2C2 271 aa16.35■□□□□ 0.21
TRIO-223ENST00000515710 HRNRQ86YZ3 2850 aaPredicted RBP16.34■□□□□ 0.21
TRIO-223ENST00000515710 BUB1B-PAK6H3BSN5 160 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 H7C2Y5 167 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 NDUFS8O00217 210 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 PRTN3P24158 256 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 REG1BP48304 166 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 SPCS3P61009 180 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 ZNF266Q14584 549 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 PDLIM3Q53GG5 364 aaPredicted RBP16.34■□□□□ 0.21
TRIO-223ENST00000515710 OR4A47Q6IF82 309 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 PDZD9Q8IXQ8 264 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 CLDND2Q8NHS1 167 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 DTD1Q8TEA8 209 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 LHX4Q969G2 390 aa16.34■□□□□ 0.21
TRIO-223ENST00000515710 CST7O76096 145 aa16.33■□□□□ 0.21
TRIO-223ENST00000515710 IL6RP08887 468 aaPredicted RBP16.33■□□□□ 0.21
TRIO-223ENST00000515710 RAB13P51153 203 aa16.33■□□□□ 0.21
TRIO-223ENST00000515710 LMO4P61968 165 aa16.33■□□□□ 0.21
TRIO-223ENST00000515710 DIAPH2-AS1Q14236 149 aa16.33■□□□□ 0.21
TRIO-223ENST00000515710 STPG2Q8N412 459 aa16.33■□□□□ 0.21
TRIO-223ENST00000515710 OR11H6Q8NGC7 330 aa16.33■□□□□ 0.21
TRIO-223ENST00000515710 OR1S2Q8NGQ3 325 aa16.33■□□□□ 0.21
TRIO-223ENST00000515710 FLYWCH2Q96CP2 140 aaKnown RBP16.33■□□□□ 0.21
TRIO-223ENST00000515710 WASHC3Q9Y3C0 194 aa16.33■□□□□ 0.21
TRIO-223ENST00000515710 MALRD1Q5VYJ5 2156 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 CEBPZOSA8MTT3 80 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 H3BP45 60 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 IFNA17P01571 189 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 IGKV1-16P04430 117 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 COX7A1P24310 79 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 ZFP36P26651 326 aaKnown RBP16.33■□□□□ 0.2
TRIO-223ENST00000515710 DYNLT3P51808 116 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 PNKDQ8N490 385 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 OR4C13Q8NGP0 309 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 OR5C1Q8NGR4 320 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 PCNPQ8WW12 178 aaKnown RBP16.33■□□□□ 0.2
TRIO-223ENST00000515710 PIMREGQ9BSJ6 248 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 KPTNQ9Y664 436 aa16.33■□□□□ 0.2
TRIO-223ENST00000515710 DOCK11Q5JSL3 2073 aa16.32■□□□□ 0.2
TRIO-223ENST00000515710 DOPEY1Q5JWR5 2465 aa16.32■□□□□ 0.2
TRIO-223ENST00000515710 DNASE2O00115 360 aaPredicted RBP16.32■□□□□ 0.2
TRIO-223ENST00000515710 OR2B8PP59922 312 aa16.32■□□□□ 0.2
TRIO-223ENST00000515710 SPANXN5Q5MJ07 72 aa16.32■□□□□ 0.2
TRIO-223ENST00000515710 FAM74A1Q5RGS3 127 aa16.32■□□□□ 0.2
TRIO-223ENST00000515710 FAM168AQ92567 244 aa16.32■□□□□ 0.2
TRIO-223ENST00000515710 GINS3Q9BRX5 216 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms