RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 MMDQ15546 238 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 POU2AF1Q16633 256 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 SP6Q3SY56 376 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 NF1P21359 2839 aa16.74■□□□□ 0.27
LSM6-207ENST00000515311 PIGBOS1A0A0B4J2F0 54 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 C9orf170A2RU37 121 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 INMT-MINDY4F8WBC2 141 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 FGF16O43320 207 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 GPR137BO60478 399 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 CDS2O95674 445 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 IGLV2-23P01705 113 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 HLA-AP01891 365 aaKnown RBP16.73■□□□□ 0.27
LSM6-207ENST00000515311 NQO2P16083 231 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 F2RL1P55085 397 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 RPL15P61313 204 aaKnown RBP16.73■□□□□ 0.27
LSM6-207ENST00000515311 UBA52P62987 128 aaKnown RBP16.73■□□□□ 0.27
LSM6-207ENST00000515311 DHRS2Q13268 280 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 TMEM187Q14656 261 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 PSG5Q15238 335 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 C4orf46Q504U0 113 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 LYG2Q86SG7 212 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 TMEM56Q96MV1 263 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 DUX5Q96PT3 197 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 TMEM56-RWDD3S4R434 201 aa16.73■□□□□ 0.27
LSM6-207ENST00000515311 SETD2Q9BYW2 2564 aaPredicted RBP16.72■□□□□ 0.27
LSM6-207ENST00000515311 NCBP2LA6PVI3 153 aaKnown RBP16.72■□□□□ 0.27
LSM6-207ENST00000515311 SRRM4A7MD48 611 aaKnown RBP16.72■□□□□ 0.27
LSM6-207ENST00000515311 RRHO14718 337 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 CNTFRP26992 372 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 UBE2KP61086 200 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 TRIM16LQ309B1 348 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 CADM3Q8N126 398 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 FAM71E2Q8N5Q1 922 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 IL22RA2Q969J5 263 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 R3HDM4Q96D70 268 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 RHOVQ96L33 236 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 KIAA1456Q9P272 454 aa16.72■□□□□ 0.27
LSM6-207ENST00000515311 MARCH11A6NNE9 402 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 PRAF2O60831 178 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 ATG12O94817 140 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 DUS4LO95620 317 aaKnown RBP16.71■□□□□ 0.27
LSM6-207ENST00000515311 IGKV1-39P01597 117 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 IGKV1D-39P04432 117 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 IL5P05113 134 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 RAB25P57735 213 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 OXA1LQ15070 435 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 VMA21Q3ZAQ7 101 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 C5orf56Q8N8D9 126 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 Q8N9W7 124 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 MINDY2Q8NBR6 621 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 BEX1Q9HBH7 125 aa16.71■□□□□ 0.27
LSM6-207ENST00000515311 CUBNO60494 3623 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 SLC25A17O43808 307 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 SAA1P0DJI8 122 aaPredicted RBP16.7■□□□□ 0.26
LSM6-207ENST00000515311 ERVK-16P61578 105 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 C5orf64Q2M2E5 130 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 LRTM2Q8N967 370 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 TEX45Q8NA69 505 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 LHFPL5Q8TAF8 219 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 VSTM2AQ8TAG5 236 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 CHPT1Q8WUD6 406 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 RBPMSQ93062 196 aaKnown RBP16.7■□□□□ 0.26
LSM6-207ENST00000515311 SEC22AQ96IW7 307 aa16.7■□□□□ 0.26
LSM6-207ENST00000515311 METTL1Q9UBP6 276 aaKnown RBP16.7■□□□□ 0.26
LSM6-207ENST00000515311 TRIM77I1YAP6 450 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 DHFRP00374 187 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 KRASP01116 189 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 AMY1AP04745 511 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 CRYGBP07316 175 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 ANKRD55Q3KP44 614 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 TMEM268Q5VZI3 342 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 LURAP1LQ8IV03 231 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 ZNF695Q8IW36 515 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 SELENOHQ8IZQ5 122 aaKnown RBP16.69■□□□□ 0.26
LSM6-207ENST00000515311 VKORC1L1Q8N0U8 176 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 PUSL1Q8N0Z8 303 aaKnown RBP16.69■□□□□ 0.26
LSM6-207ENST00000515311 LGI3Q8N145 548 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 DMBX1Q8NFW5 382 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 CASTOR1Q8WTX7 329 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 NPFFR1Q9GZQ6 430 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 SIGLEC9Q9Y336 463 aa16.69■□□□□ 0.26
LSM6-207ENST00000515311 FAM181BA6NEQ2 426 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 OR2A4O95047 310 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 G6PCP35575 357 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 OR4A47Q6IF82 309 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 OR4A5Q8NH83 315 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 COQ8AQ8NI60 647 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 ZNF431Q8TF32 576 aaPredicted RBP16.68■□□□□ 0.26
LSM6-207ENST00000515311 MITD1Q8WV92 249 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 OR2A7Q96R45 310 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 RASL11BQ9BPW5 248 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 SEC22CQ9BRL7 303 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 FBXL15Q9H469 300 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 GPN1Q9HCN4 374 aaPredicted RBP16.68■□□□□ 0.26
LSM6-207ENST00000515311 BET1LQ9NYM9 111 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 PRR13Q9NZ81 148 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 JMJD1CQ15652 2540 aa16.68■□□□□ 0.26
LSM6-207ENST00000515311 A0A0B4J2A0 478 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 DUXBA0A1W2PPF3 345 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 CREBL2O60519 120 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms