RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 CACNA1BQ00975 2339 aa0.33□□□□□ -2.36
MBD4-210ENST00000515266 SCAF11Q99590 1463 aaKnown RBP0.33□□□□□ -2.36
MBD4-210ENST00000515266 SYNE2Q8WXH0 6885 aaKnown RBP0.33□□□□□ -2.36
MBD4-210ENST00000515266 DSCAMO60469 2012 aa0.33□□□□□ -2.36
MBD4-210ENST00000515266 TMED7-TICAM2A0A0A6YYA0 188 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 LOC100506127A0A0U1RQW1 187 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 DAPL1A0PJW8 107 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 MEIS3P1A6NDR6 274 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 SCN2BO60939 215 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 TFPTP0C1Z6 253 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 CXCL3P19876 107 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 AP1S1P61966 158 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 HIST1H4AP62805 103 aaKnown RBP0.32□□□□□ -2.36
MBD4-210ENST00000515266 FABP5Q01469 135 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 Q3ZCU0 254 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 TMEM86AQ8N2M4 240 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 RPP25LQ8N5L8 163 aaKnown RBP0.32□□□□□ -2.36
MBD4-210ENST00000515266 ATP6V1C2Q8NEY4 427 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 OR5AK3PQ8NH89 298 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 GMEB1Q9Y692 573 aa0.32□□□□□ -2.36
MBD4-210ENST00000515266 BAZ2BQ9UIF8 2168 aaKnown RBP0.32□□□□□ -2.36
MBD4-210ENST00000515266 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 GEMIN2O14893 280 aaKnown RBP0.31□□□□□ -2.36
MBD4-210ENST00000515266 AZIN1O14977 448 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 HLA-DQB2P05538 268 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 S100A9P06702 114 aaKnown RBP0.31□□□□□ -2.36
MBD4-210ENST00000515266 TRGC1P0CF51 173 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 KDELR2P33947 212 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 AKR1C1Q04828 323 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 PLPPR5Q32ZL2 321 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 C10orf55Q5SWW7 151 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.31□□□□□ -2.36
MBD4-210ENST00000515266 UMODL1-AS1Q8N2C9 162 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 RIBC1Q8N443 379 aaPredicted RBP0.31□□□□□ -2.36
MBD4-210ENST00000515266 RAB2BQ8WUD1 216 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 LRRC45Q96CN5 670 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 TMEM109Q9BVC6 243 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 LHFPL6Q9Y693 200 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 TONSLQ96HA7 1378 aa0.31□□□□□ -2.36
MBD4-210ENST00000515266 NUP160Q12769 1436 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 WDR90Q96KV7 1748 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 TRAPPC2LH3BP13 241 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 PPBPP02775 128 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 RNASE3P12724 160 aaKnown RBP0.3□□□□□ -2.36
MBD4-210ENST00000515266 ZNHIT3Q15649 155 aaPredicted RBP0.3□□□□□ -2.36
MBD4-210ENST00000515266 RASSF6Q6ZTQ3 369 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 C17orf78Q8N4C9 275 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 RBP7Q96R05 134 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 NSRP1Q9H0G5 558 aaKnown RBP0.3□□□□□ -2.36
MBD4-210ENST00000515266 ZNHIT6Q9NWK9 470 aaKnown RBP0.3□□□□□ -2.36
MBD4-210ENST00000515266 C1orf109Q9NX04 203 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 NAT8Q9UHE5 227 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 FREM1Q5H8C1 2179 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 FLT4P35916 1363 aa0.3□□□□□ -2.36
MBD4-210ENST00000515266 SMARCA4P51532 1647 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 MKRN2OSH3BPM6 223 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 REG1BP48304 166 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 RPS24P62847 133 aaKnown RBP0.29□□□□□ -2.36
MBD4-210ENST00000515266 HLA-DRB5Q30154 266 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 SAPCD1Q5SSQ6 148 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 FAM27BQ5VT28 67 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 SPATA24Q86W54 205 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 OR8B3Q8NGG8 313 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 OR5L1Q8NGL2 311 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 TESCQ96BS2 214 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 MED10Q9BTT4 135 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 SNURFQ9Y675 71 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 THSD7AQ9UPZ6 1657 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 SETD5Q9C0A6 1442 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 POLEQ07864 2286 aa0.29□□□□□ -2.36
MBD4-210ENST00000515266 TEX50A0A1B0GTY4 177 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 TMEM269A0A1B0GVZ9 245 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 A0A1B0GW54 56 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 SLCO1A2P46721 670 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 HLA-DRB3P79483 266 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 SLAMF1Q13291 335 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 JOSD1Q15040 202 aaPredicted RBP0.28□□□□□ -2.36
MBD4-210ENST00000515266 EBPQ15125 230 aaKnown RBP0.28□□□□□ -2.36
MBD4-210ENST00000515266 DNAL1Q4LDG9 190 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 C9orf64Q5T6V5 341 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 ZNF565Q8N9K5 539 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 SLC37A2Q8TED4 501 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 ACOT12Q8WYK0 555 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 CCL13Q99616 98 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 TP53TG1Q9Y2A0 90 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 A0A1W2PP64 1363 aa0.28□□□□□ -2.36
MBD4-210ENST00000515266 ANKRD17O75179 2603 aaKnown RBP0.28□□□□□ -2.37
MBD4-210ENST00000515266 C5orf49A4QMS7 147 aa0.27□□□□□ -2.37
MBD4-210ENST00000515266 CCRL2O00421 344 aa0.27□□□□□ -2.37
MBD4-210ENST00000515266 COX7A2LO14548 114 aa0.27□□□□□ -2.37
MBD4-210ENST00000515266 ATP8B1O43520 1251 aa0.27□□□□□ -2.37
MBD4-210ENST00000515266 RD3LP0DJH9 198 aa0.27□□□□□ -2.37
MBD4-210ENST00000515266 MSNP26038 577 aaKnown RBP0.27□□□□□ -2.37
MBD4-210ENST00000515266 RPL30P62888 115 aaKnown RBP0.27□□□□□ -2.37
MBD4-210ENST00000515266 DHFR2Q86XF0 187 aa0.27□□□□□ -2.37
MBD4-210ENST00000515266 ZNF439Q8NDP4 499 aa0.27□□□□□ -2.37
MBD4-210ENST00000515266 GNPNAT1Q96EK6 184 aaPredicted RBP0.27□□□□□ -2.37
MBD4-210ENST00000515266 CD300AQ9UGN4 299 aa0.27□□□□□ -2.37
MBD4-210ENST00000515266 LRPPRCP42704 1394 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms