RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 NCOR1P1Q9H4R4 102 aa11.21□□□□□ -0.62
TCOF1-213ENST00000514442 OR2H2O95918 312 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 CBLN1P23435 193 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 NFAM1Q8NET5 270 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-213ENST00000514442 GUCD1Q96NT3 240 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
TCOF1-213ENST00000514442 TBL2Q9Y4P3 447 aaKnown RBP11.2□□□□□ -0.62
TCOF1-213ENST00000514442 CAMPP49913 170 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 TMPRSS3P57727 454 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 OR2T6Q8NHC8 308 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 GPHA2Q96T91 129 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 PRR19A6NJB7 356 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 ZIC3O60481 467 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 CLDN14O95500 239 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 ORAOV1Q8WV07 137 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 IMMP1LQ96LU5 166 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 HLA-DQA1P01909 254 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 BTF3P20290 206 aaKnown RBP11.2□□□□□ -0.62
TCOF1-213ENST00000514442 SUPT4H1P63272 117 aaKnown RBP11.2□□□□□ -0.62
TCOF1-213ENST00000514442 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 LRRC75AQ8NAA5 344 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 TMEM54Q969K7 222 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 OR4C12Q96R67 309 aa11.2□□□□□ -0.62
TCOF1-213ENST00000514442 SLC25A10Q9UBX3 287 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-213ENST00000514442 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-213ENST00000514442 WNT10AQ9GZT5 417 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 AMMECR1Q9Y4X0 333 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-213ENST00000514442 LINC00596Q86U02 117 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 BLNKQ8WV28 456 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 C18orf12Q96KH6 178 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 PPIAL4EA0A075B759 164 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 HELTA6NFD8 242 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 PPIAL4DF5H284 164 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 PPIAL4FP0DN26 164 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 RPL31P62899 125 aaKnown RBP11.19□□□□□ -0.62
TCOF1-213ENST00000514442 TMEM204Q9BSN7 226 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 PPIAL4AQ9Y536 164 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 SERTM2A0A1B0GWG4 89 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 ATXN7O15265 892 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-213ENST00000514442 SERF1AO75920 110 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 FCER1GP30273 86 aa11.19□□□□□ -0.62
TCOF1-213ENST00000514442 QTRT1Q9BXR0 403 aaKnown RBP11.19□□□□□ -0.62
TCOF1-213ENST00000514442 ITGB1BP1O14713 200 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 NPBWR2P48146 333 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 UBE2V1Q13404 147 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 Q5PR19 223 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 FNDC7Q5VTL7 733 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 GPR146Q96CH1 333 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 ZNF837Q96EG3 531 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-213ENST00000514442 ADTRPQ96IZ2 230 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 TMEM167BQ9NRX6 74 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 AMY1AP04745 511 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 CTSSP25774 331 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 ADMP35318 185 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 CEACAM3P40198 252 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 FBLN5Q9UBX5 448 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 CLN8Q9UBY8 286 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 WDR81Q562E7 1941 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 MGAMO43451 1857 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 C9orf172C9J069 976 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 ORM2P19652 201 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 SRIP30626 198 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 C10orf128Q5T292 105 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 FAM166AQ6J272 317 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 DNM1P46Q6ZS02 220 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 PAQR4Q8N4S7 273 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-213ENST00000514442 KLF14Q8TD94 323 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-213ENST00000514442 SSMEM1Q8WWF3 244 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 HSD17B10Q99714 261 aaKnown RBP11.18□□□□□ -0.62
TCOF1-213ENST00000514442 HSPB8Q9UJY1 196 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 POLR3KQ9Y2Y1 108 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-213ENST00000514442 ZNF785A8K8V0 405 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 LDLRAD4O15165 306 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 HBZP02008 142 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 HARBI1Q96MB7 349 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 IMMP2LQ96T52 175 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 ZNF430Q9H8G1 570 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-213ENST00000514442 SH2D2AQ9NP31 389 aa11.18□□□□□ -0.62
TCOF1-213ENST00000514442 A0A1W2PN81 502 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 RND2P52198 227 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 ARTNQ5T4W7 220 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 SAMD13Q5VXD3 122 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 Q96M66 194 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 IGLV3-12A0A075B6K2 115 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 HTR1DP28221 377 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 UNQ6494/PRO21346Q6UXR6 183 aa11.17□□□□□ -0.62
TCOF1-213ENST00000514442 UQCRFS1P47985 274 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 LYZP61626 148 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 NDFIP1Q9BT67 221 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 S1PR2O95136 353 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 SLC35B1P78383 322 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 LHFPL1Q86WI0 220 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 OR1L1Q8NH94 360 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 PRDM14Q9GZV8 571 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms