RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 HIST2H2BDQ6DRA6 164 aa6.49□□□□□ -1.37
SMAD1-209ENST00000511125 GSG1LQ6UXU4 331 aa6.49□□□□□ -1.37
SMAD1-209ENST00000511125 C19orf35Q6ZS72 473 aa6.49□□□□□ -1.37
SMAD1-209ENST00000511125 ZNF833PQ6ZTB9 187 aa6.49□□□□□ -1.37
SMAD1-209ENST00000511125 OR1S1Q8NH92 325 aa6.49□□□□□ -1.37
SMAD1-209ENST00000511125 ABHD5Q8WTS1 349 aa6.49□□□□□ -1.37
SMAD1-209ENST00000511125 RBPMSQ93062 196 aaKnown RBP6.49□□□□□ -1.37
SMAD1-209ENST00000511125 ZDHHC16Q969W1 377 aa6.49□□□□□ -1.37
SMAD1-209ENST00000511125 SSX3Q99909 188 aa6.49□□□□□ -1.37
SMAD1-209ENST00000511125 ZNF436Q9C0F3 470 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-209ENST00000511125 ALX4Q9H161 411 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-209ENST00000511125 WRBO00258 174 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 FCN1O00602 326 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 LY6G6DO95868 133 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 POLR2GP62487 172 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMAD1-209ENST00000511125 RTL8BQ17RB0 113 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 OR11H6Q8NGC7 330 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 OR10A7Q8NGE5 316 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 ZNF486Q96H40 463 aaPredicted RBP6.48□□□□□ -1.37
SMAD1-209ENST00000511125 ST6GAL2Q96JF0 529 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 A0A1W2PPI3 338 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 RNF212BA8MTL3 300 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 SNRPGP15A8MWD9 76 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 H3BUX3 64 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 CDS2O95674 445 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 IFNA17P01571 189 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 REG1AP05451 166 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 UCP1P25874 307 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 THBS3P49746 956 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 RAB32Q13637 225 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 PPP1R1CQ8WVI7 109 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 C18orf12Q96KH6 178 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 TMEM140Q9NV12 185 aa6.48□□□□□ -1.37
SMAD1-209ENST00000511125 A0A087X0M5 115 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 A0A1B0GX30 115 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 TSC22D2O75157 780 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 IGHV4-59P01825 116 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 SAA1P0DJI8 122 aaPredicted RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 SULT1A3P0DMM9 295 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 SULT1A4P0DMN0 295 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 CEACAM3P40198 252 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 RAG2P55895 527 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 EIF4EBP1Q13541 118 aaPredicted RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 THOC7Q6I9Y2 204 aaKnown RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 ZNF66Q6ZN08 573 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 BEND2Q8NDZ0 799 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 GALNT14Q96FL9 552 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 QTRT1Q9BXR0 403 aaKnown RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 AMMECR1Q9Y4X0 333 aaPredicted RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 POM121CA8CG34 1229 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 ODF3BA8MYP8 253 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 SSSCA1O60232 199 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 ERVK-16P61578 105 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 OR4A47Q6IF82 309 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 OR4S2Q8NH73 311 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 NANPQ8TBE9 248 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 AJUBAQ96IF1 538 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 WASHC3Q9Y3C0 194 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 INAFM1C9JVW0 142 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 E7EUB6 86 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 VENTXO95231 258 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 IGHV3-48P01763 117 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 TMEM11P17152 192 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 EIF2B2P49770 351 aaKnown RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 MECP2P51608 486 aaKnown RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 RND3P61587 244 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 DEFA5Q01523 94 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 OR10W1Q8NGF6 305 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 OR4A16Q8NH70 328 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 DDB2Q92466 427 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 EAF1Q96JC9 268 aaPredicted RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 TOLLIPQ9H0E2 274 aa6.47□□□□□ -1.37
SMAD1-209ENST00000511125 METTL1Q9UBP6 276 aaKnown RBP6.47□□□□□ -1.37
SMAD1-209ENST00000511125 IGHV3-21A0A0B4J1V1 117 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 LY6LH3BQJ8 138 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 HPRT1P00492 218 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 CD99P14209 185 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 TNXAQ16473 311 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 C1orf122Q6ZSJ8 110 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 LINC00311Q8N616 119 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 KIR3DL3Q8N743 410 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 ZBTB34Q8NCN2 500 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 OR11H4Q8NGC9 324 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 OR5M8Q8NGP6 311 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 SMIM3Q9BZL3 60 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 ZC4H2Q9NQZ6 224 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 OR5AC2Q9NZP5 309 aa6.46□□□□□ -1.37
SMAD1-209ENST00000511125 ARPC5O15511 151 aa6.46□□□□□ -1.38
SMAD1-209ENST00000511125 CNIH1O95406 144 aa6.46□□□□□ -1.38
SMAD1-209ENST00000511125 NQO2P16083 231 aa6.46□□□□□ -1.38
SMAD1-209ENST00000511125 VDAC1P21796 283 aa6.46□□□□□ -1.38
SMAD1-209ENST00000511125 KRTAP1-1Q07627 177 aa6.46□□□□□ -1.38
SMAD1-209ENST00000511125 HABP2Q14520 560 aaPredicted RBP6.46□□□□□ -1.38
SMAD1-209ENST00000511125 OR5AN1Q8NGI8 311 aa6.46□□□□□ -1.38
SMAD1-209ENST00000511125 COMMD9Q9P000 198 aa6.46□□□□□ -1.38
SMAD1-209ENST00000511125 A0A0B4J2A0 478 aa6.45□□□□□ -1.38
SMAD1-209ENST00000511125 LINC01548A6NM66 108 aa6.45□□□□□ -1.38
SMAD1-209ENST00000511125 CEBPZOSA8MTT3 80 aa6.45□□□□□ -1.38
SMAD1-209ENST00000511125 MBPP02686 304 aaPredicted RBP6.45□□□□□ -1.38
SMAD1-209ENST00000511125 RBP4P02753 201 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms