RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CSN2P05814 226 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 H2AFXP16104 143 aaPredicted RBP4.16□□□□□ -1.74
USP53-206ENST00000510737 PRKACAP17612 351 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 SPI1P17947 270 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 HLA-DMBP28068 263 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 SSTR5P35346 364 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 STX1BP61266 288 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 DEFA5Q01523 94 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 SCN1BQ07699 218 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 DGCR6Q14129 220 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 CRMP1Q14194 572 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 ATXN7L3Q14CW9 347 aaPredicted RBP4.16□□□□□ -1.74
USP53-206ENST00000510737 UBE2V2Q15819 145 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 RPEL1Q2QD12 228 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 LRRC23Q53EV4 343 aaPredicted RBP4.16□□□□□ -1.74
USP53-206ENST00000510737 Q6P435 159 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 C5orf24Q7Z6I8 188 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 ERI1Q8IV48 349 aaKnown RBP4.16□□□□□ -1.74
USP53-206ENST00000510737 IFT20Q8IY31 132 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 TMEM61Q8N0U2 210 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 TSPAN14Q8NG11 270 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 NPBQ8NG41 125 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 OR10A7Q8NGE5 316 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 OR6K6Q8NGW6 343 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 OR11H2Q8NH07 326 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 FANK1Q8TC84 345 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 DYNLRB2Q8TF09 96 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 THEM6Q8WUY1 208 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 PBOV1Q9GZY1 135 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 CST11Q9H112 138 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 HMG20AQ9NP66 347 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 EXOSC4Q9NPD3 245 aaKnown RBP4.16□□□□□ -1.74
USP53-206ENST00000510737 TECRQ9NZ01 308 aaKnown RBP4.16□□□□□ -1.74
USP53-206ENST00000510737 GSTK1Q9Y2Q3 226 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 KLHDC2Q9Y2U9 406 aa4.16□□□□□ -1.74
USP53-206ENST00000510737 MEIKINA0A087WXM9 373 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 A0A0G2JLM5 398 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 TRBV2A0A0J9YWF9 115 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 A0A1B0GTI1 187 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 TMEM269A0A1B0GVZ9 245 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 C2orf70A6NJV1 201 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 SLC33A1O00400 549 aaPredicted RBP4.15□□□□□ -1.75
USP53-206ENST00000510737 DHRS3O75911 302 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 NDUFA3O95167 84 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 TTRP02766 147 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 LYNP07948 512 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 CBLN1P23435 193 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 CD40LGP29965 261 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 GLP1RP43220 463 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 HCCSP53701 268 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 TIMM50Q3ZCQ8 353 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 SPIN3Q5JUX0 258 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 ZNF767PQ75MW2 155 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 TMEM179BQ7Z7N9 219 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 C8orf31Q8N9H6 132 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 OR5T1Q8NG75 326 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 OR51T1Q8NGJ9 327 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 OR52J3Q8NH60 311 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 INTS14Q96SY0 518 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 ZNF251Q9BRH9 671 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 DHRS4-AS1Q9P1J3 65 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 UBQLN2Q9UHD9 624 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 KIF25Q9UIL4 384 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 V9GYS6 101 aa4.15□□□□□ -1.75
USP53-206ENST00000510737 A0A0B4J203 849 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 IGKV1-12A0A0C4DH73 117 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 LOC110117498-PIK3R3F6TDL0 507 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 S1PR2O95136 353 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 IFNA21P01568 189 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 IFNA17P01571 189 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 IGKV1D-12P01611 117 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 ZNF44P15621 663 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 ZNF137PP52743 207 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 BLVRAP53004 296 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 ANKRD55Q3KP44 614 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 CT45A1Q5HYN5 189 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 Q6ZSR3 168 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 SLC25A48Q6ZT89 311 aaKnown RBP4.14□□□□□ -1.75
USP53-206ENST00000510737 Q8IYB0 196 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 CT45A3Q8NHU0 189 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 OTOSQ8NHW6 89 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 CACNG8Q8WXS5 425 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 CLCC1Q96S66 551 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 PAIP2Q9BPZ3 127 aaKnown RBP4.14□□□□□ -1.75
USP53-206ENST00000510737 EBF4Q9BQW3 602 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 CHRDL1Q9BU40 450 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 FBXL15Q9H469 300 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 NCOR1P1Q9H4R4 102 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 MLXQ9UH92 298 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 ENPP4Q9Y6X5 453 aa4.14□□□□□ -1.75
USP53-206ENST00000510737 DEFB131BA0A096LNP1 70 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 IGHV3-43A0A0B4J1X8 118 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 C15orf65H3BRN8 121 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 DEGS1O15121 323 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 SELENOFO60613 162 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 DIRAS1O95057 198 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 ZNF682O95780 498 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 IGHV3-43DP0DP04 118 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 IL3RAP26951 378 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 GSSP48637 474 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms