RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SOX15O60248 233 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 SNNO75324 88 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 AHSA1O95433 338 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 CCL3L1P16619 93 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 RPS4Y1P22090 263 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 FKBP2P26885 142 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 TGM4P49221 684 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 GDI2P50395 445 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 ENDOGQ14249 297 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 OR8B8Q15620 311 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 HIST3H3Q16695 136 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 SLC36A2Q495M3 483 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 ORMDL2Q53FV1 153 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 FAM27D1Q5T7N8 215 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 SLC25A24Q6NUK1 477 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 TNFAIP8L2Q6P589 184 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 KRTCAP2Q8N6L1 136 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 CLDN22Q8N7P3 220 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 FBXO36Q8NEA4 188 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 C1orf64Q8NEQ6 169 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 OR8G5Q8NG78 346 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 RPS4Y2Q8TD47 263 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 H1FXQ92522 213 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 ITFG2Q969R8 447 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 MRGPRFQ96AM1 343 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 PPCDCQ96CD2 204 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 ANP32EQ9BTT0 268 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 TMEM43Q9BTV4 400 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 OR51I1Q9H343 314 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 C1orf198Q9H425 327 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 C19orf12Q9NSK7 152 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 GLTPQ9NZD2 209 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 PTTG3PQ9NZH4 202 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 KAAG1Q9UBP8 84 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 SLC35A3Q9Y2D2 325 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 MRPS7Q9Y2R9 242 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 KLK5Q9Y337 293 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 TMED5Q9Y3A6 229 aa2.05□□□□□ -2.08
TOPBP1-206ENST00000508524 IZUMO1RA6ND01 250 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 SYCE1LA8MT33 242 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 A8MT66 165 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 IQCF6A8MYZ5 107 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 CCRL2O00421 344 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 PLPP3O14495 311 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 DNALI1O14645 258 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 AIM2O14862 343 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 RAB3BP20337 219 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 DCKP27707 260 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 CD200P41217 278 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 SRP9P49458 86 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 DYNLT3P51808 116 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 DLX6P56179 175 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 HBA1P69905 142 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 NAB1Q13506 487 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 Q5VSD8 79 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 TEX36Q5VZQ5 186 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 STUMQ69YW2 141 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 LRRC74BQ6ZQY2 392 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 LYPD6Q86Y78 171 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 CLECL1Q8IZS7 167 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 SPANXA2-OT1Q8N9U9 137 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 TMEM104Q8NE00 496 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 OR11H1Q8NG94 326 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 DCAKDQ8WVC6 231 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 ROPN1LQ96C74 230 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 GAFA1Q96PS6 74 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 OR5B12Q96R08 314 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 TIMM17AQ99595 171 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 WFDC6Q9BQY6 131 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 ALX4Q9H161 411 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 NMRK1Q9NWW6 199 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 TAS2R5Q9NYW4 299 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 NDUFAF1Q9Y375 327 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 HILPDAQ9Y5L2 63 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 PEX16Q9Y5Y5 336 aa2.04□□□□□ -2.08
TOPBP1-206ENST00000508524 TRAV38-1A0A0B4J264 116 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 A0A1B0GWA3 101 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 ZNF98A6NK75 572 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 I3L521 148 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 HMGN4O00479 90 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 KLHL2O95198 593 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 PTHP01270 115 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 HLA-DQB1P01920 261 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 OR8U9P0C7N5 309 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 PGA5P0DJD9 388 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 NQO1P15559 274 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 GSTM3P21266 225 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 SLC6A1P30531 599 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 INSL3P51460 131 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 SPA17Q15506 151 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 ZCCHC23Q6ZST2 131 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 SLC35D2Q76EJ3 337 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 OR11L1Q8NGX0 322 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 SFXN5Q8TD22 340 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 MYOZ3Q8TDC0 251 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 TCP10LQ8TDR4 215 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 MAGOHBQ96A72 148 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 SLC25A44Q96H78 314 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 TMED9Q9BVK6 235 aa2.03□□□□□ -2.08
TOPBP1-206ENST00000508524 KRTAP4-1Q9BYQ7 146 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms