RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 RBFOX2O43251 390 aaKnown RBP eCLIP15.46■□□□□ 0.07
SFXN1-209ENST00000508290 HRASP01112 189 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 PTHLHP12272 177 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 EGFEM1PQ0D2K5 195 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 DYRK1AQ13627 763 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 POC5Q8NA72 575 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 OR11H1Q8NG94 326 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 CD300LFQ8TDQ1 290 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 GPX8Q8TED1 209 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 SLC5A7Q9GZV3 580 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 TAS2R8Q9NYW2 309 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 EHFQ9NZC4 300 aa15.46■□□□□ 0.07
SFXN1-209ENST00000508290 A0A0G2JLM5 398 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 LGALS1P09382 135 aaKnown RBP15.45■□□□□ 0.06
SFXN1-209ENST00000508290 RAB25P57735 213 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 RPL30P62888 115 aaKnown RBP15.45■□□□□ 0.06
SFXN1-209ENST00000508290 DEFB136Q30KP8 78 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 OR1N2Q8NGR9 330 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 RAB2BQ8WUD1 216 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 SPIN2AQ99865 258 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 SPIN2BQ9BPZ2 258 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 GNB4Q9HAV0 340 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 CCL28Q9NRJ3 127 aa15.45■□□□□ 0.06
SFXN1-209ENST00000508290 SAA1P0DJI8 122 aaPredicted RBP15.44■□□□□ 0.06
SFXN1-209ENST00000508290 RCVRNP35243 200 aa15.44■□□□□ 0.06
SFXN1-209ENST00000508290 TPPP2P59282 170 aa15.44■□□□□ 0.06
SFXN1-209ENST00000508290 SSBP2P81877 361 aaPredicted RBP15.44■□□□□ 0.06
SFXN1-209ENST00000508290 PJVKQ0ZLH3 352 aa15.44■□□□□ 0.06
SFXN1-209ENST00000508290 DCTN2Q13561 401 aaKnown RBP15.44■□□□□ 0.06
SFXN1-209ENST00000508290 C9orf66Q5T8R8 295 aa15.44■□□□□ 0.06
SFXN1-209ENST00000508290 OR6F1Q8NGZ6 308 aa15.44■□□□□ 0.06
SFXN1-209ENST00000508290 DUX3Q96PT4 197 aa15.44■□□□□ 0.06
SFXN1-209ENST00000508290 NAA50Q9GZZ1 169 aaKnown RBP15.44■□□□□ 0.06
SFXN1-209ENST00000508290 MEIS3P1A6NDR6 274 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 HPGDSO60760 199 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 OR2A4O95047 310 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 ELK1P19419 428 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 MAS1LP35410 378 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 INSL3P51460 131 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 FXYD4P59646 89 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 TNXAQ16473 311 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 CMTM1Q8IZ96 169 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 MOB3AQ96BX8 217 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 OR2A7Q96R45 310 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 PHB2Q99623 299 aa15.43■□□□□ 0.06
SFXN1-209ENST00000508290 AURKAIP1Q9NWT8 199 aaPredicted RBP15.43■□□□□ 0.06
SFXN1-209ENST00000508290 FAM25AB3EWG3 89 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 FAM25CB3EWG5 89 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 FAM25GB3EWG6 89 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 RAMP3O60896 148 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 TRGV3P03979 118 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 FGF2P09038 288 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 S100GP29377 79 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 TMBIM6P55061 237 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 OR2B11Q5JQS5 317 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 LPCAT3Q6P1A2 487 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 SLC25A42Q86VD7 318 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 OR4A5Q8NH83 315 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 TMEM167AQ8TBQ9 72 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 SRSF12Q8WXF0 261 aaKnown RBP15.42■□□□□ 0.06
SFXN1-209ENST00000508290 RHOVQ96L33 236 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 ZNF2Q9BSG1 426 aaPredicted RBP15.42■□□□□ 0.06
SFXN1-209ENST00000508290 ZNF430Q9H8G1 570 aaPredicted RBP15.42■□□□□ 0.06
SFXN1-209ENST00000508290 ZNF355PQ9NSJ1 428 aa15.42■□□□□ 0.06
SFXN1-209ENST00000508290 MSGN1A6NI15 193 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 LINC01619G3V211 115 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 NOL3O60936 208 aaKnown RBP15.41■□□□□ 0.06
SFXN1-209ENST00000508290 KBTBD11O94819 623 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 FCER2P06734 321 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 RPL5P46777 297 aaKnown RBP15.41■□□□□ 0.06
SFXN1-209ENST00000508290 TAS2R31P59538 309 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 MRGPRG-AS1Q2M3A8 158 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 IDO2Q6ZQW0 420 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 TMEM17Q86X19 198 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 SNX29P2Q8IUI4 249 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 SPAG16Q8N0X2 631 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 PUSL1Q8N0Z8 303 aaKnown RBP15.41■□□□□ 0.06
SFXN1-209ENST00000508290 USMG5Q96IX5 58 aa15.41■□□□□ 0.06
SFXN1-209ENST00000508290 C13orf42A0A1B0GVH6 325 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 MPPED1O15442 326 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 HPRT1P00492 218 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 PMP2P02689 132 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 HSPB1P04792 205 aaKnown RBP15.4■□□□□ 0.06
SFXN1-209ENST00000508290 OR9G9P0C7N8 305 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 TBPP20226 339 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 GNRHRP30968 328 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 HRH1P35367 487 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 RFX2P48378 723 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 ZNF818PQ6ZRF7 136 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 OR5T1Q8NG75 326 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 MRAPQ8TCY5 172 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 MS4A10Q96PG2 267 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 OR5B12Q96R08 314 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 TINAGL1Q9GZM7 467 aaPredicted RBP15.4■□□□□ 0.06
SFXN1-209ENST00000508290 PLEKHA2Q9HB19 425 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 BET1LQ9NYM9 111 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 RABL2AQ9UBK7 228 aaPredicted RBP15.4■□□□□ 0.06
SFXN1-209ENST00000508290 RABL2BQ9UNT1 228 aa15.4■□□□□ 0.06
SFXN1-209ENST00000508290 SEC14L6B5MCN3 397 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 TNFSF12O43508 249 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms