RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 ZNF322Q6U7Q0 402 aaPredicted RBP0.88□□□□□ -2.27
SMN2-208ENST00000508258 TMPPEQ6ZT21 453 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CCDC121Q6ZUS5 278 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 C2orf91Q6ZV80 131 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 LRRC25Q8N386 305 aaPredicted RBP0.88□□□□□ -2.27
SMN2-208ENST00000508258 SLC22A24Q8N4F4 322 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CLDN22Q8N7P3 220 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 DAND5Q8N907 189 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CNEP1R1Q8N9A8 125 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 OR51D1Q8NGF3 324 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CLDND2Q8NHS1 167 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 RPS4Y2Q8TD47 263 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 RAB2BQ8WUD1 216 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 ANKRD7Q92527 254 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CHMP6Q96FZ7 201 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 SFRP2Q96HF1 295 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 ZNF471Q9BX82 626 aaPredicted RBP0.88□□□□□ -2.27
SMN2-208ENST00000508258 AICDAQ9GZX7 198 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 TMEM222Q9H0R3 208 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.88□□□□□ -2.27
SMN2-208ENST00000508258 VPS29Q9UBQ0 182 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 PSORS1C2Q9UIG4 136 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 AK3Q9UIJ7 227 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 SLIT2O94813 1529 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 SHANK1Q9Y566 2161 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 IGKV3D-11A0A0A0MRZ8 115 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 A0A1B0GV50 99 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 MDFIC2A0A1B0GVS7 189 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 A0A1B0GW54 56 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 VPS37CA5D8V6 355 aaPredicted RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 TMEM235A6NFC5 223 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 SMIM9A6NGZ8 99 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 H3BPC8 53 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 UBE2L6O14933 153 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 PLA2G10O15496 165 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 TRAPPC3O43617 180 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 ZNF73O43830 326 aaPredicted RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 FADS1O60427 444 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 ZNF189O75820 626 aaPredicted RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 IFNA6P05013 189 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 FAM228BP0C875 321 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 GZMBP10144 247 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 FGF6P10767 208 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 CPMP14384 443 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 HIST1H1TP22492 207 aaPredicted RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 CD24P25063 80 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 BLVRBP30043 206 aaPredicted RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 RPL27AP46776 148 aaKnown RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 XCL1P47992 114 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 GZMMP51124 257 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 TAS2R30P59541 319 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 FOXF1Q12946 379 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 ACOT6Q3I5F7 207 aaPredicted RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 HIST2H3PS2Q5TEC6 136 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 PACRGLQ8N7B6 248 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 OR4C16Q8NGL9 310 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 OR5C1Q8NGR4 320 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 OR2T4Q8NH00 348 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 SMCR5Q8TEV8 140 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 C12orf43Q96C57 262 aaKnown RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 CNBD2Q96M20 576 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 C20orf166-AS1Q96NR2 134 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 OR52E6Q96RD3 313 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 NMNAT3Q96T66 252 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 PECRQ9BY49 303 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 TLNRD1Q9H1K6 362 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 CXorf21Q9HAI6 301 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 GPR84Q9NQS5 396 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 TXNL4BQ9NX01 149 aaKnown RBP0.87□□□□□ -2.27
SMN2-208ENST00000508258 PRELID1Q9Y255 219 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 CCL26Q9Y258 94 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 FAM215AQ9Y5M1 114 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 MINOS1-NBL1R4GNA1 71 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 WRNQ14191 1432 aaPredicted RBP eCLIP0.87□□□□□ -2.27
SMN2-208ENST00000508258 NCOA1Q15788 1441 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 ADGRL3Q9HAR2 1447 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 LTBP2Q14767 1821 aa0.87□□□□□ -2.27
SMN2-208ENST00000508258 WDR90Q96KV7 1748 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 NLRC5Q86WI3 1866 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 DSCAMO60469 2012 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 MTUS2Q5JR59 1369 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 ATG2BQ96BY7 2078 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 ADAMTS7Q9UKP4 1686 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 MUC21A0A0G2JKD1 596 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 A0A0J9YX75 114 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 MUC21A0A140T8X8 626 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 PQLC2LA1A4F0 135 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 SDHAF1A6NFY7 115 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 C3orf84H3BNL1 204 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 BHLHE40O14503 412 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 GNRH2O43555 120 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 ATP5HO75947 161 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 NSA2O95478 260 aaKnown RBP0.86□□□□□ -2.27
SMN2-208ENST00000508258 HAND1O96004 215 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 NPYP01303 97 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 IGKV4-1P06312 121 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 ZNF728P0DKX0 622 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 CD79AP11912 226 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 HSD11B1P28845 292 aa0.86□□□□□ -2.27
SMN2-208ENST00000508258 CD200P41217 278 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms