RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 C22orf34Q6ZV56 151 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 C1orf87Q8N0U7 546 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 EDARADDQ8WWZ3 215 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 GGACTQ9BVM4 153 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 TANC2Q9HCD6 1990 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 MBD3L4A6NDZ8 208 aaPredicted RBP9.04□□□□□ -0.96
LIN54-207ENST00000508171 MBD3L3A6NE82 208 aaPredicted RBP9.04□□□□□ -0.96
LIN54-207ENST00000508171 MBD3L5A6NJ08 208 aaPredicted RBP9.04□□□□□ -0.96
LIN54-207ENST00000508171 RRHO14718 337 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 MGST3O14880 152 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 SOD3P08294 240 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 DUX4L9Q6RFH8 374 aaPredicted RBP9.04□□□□□ -0.96
LIN54-207ENST00000508171 NECAP1Q8NC96 275 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 MBD3L2Q8NHZ7 208 aaPredicted RBP9.04□□□□□ -0.96
LIN54-207ENST00000508171 MEGF10Q96KG7 1140 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 SNX22Q96L94 193 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 ACTR3CQ9C0K3 210 aaPredicted RBP9.04□□□□□ -0.96
LIN54-207ENST00000508171 PARLQ9H300 379 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 NAT8Q9UHE5 227 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 TNCP24821 2201 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 TRAV38-1A0A0B4J264 116 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 HPRT1P00492 218 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 MBP02144 154 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 CD1BP29016 333 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 RPL23P62829 140 aaKnown RBP9.04□□□□□ -0.96
LIN54-207ENST00000508171 RTP5Q14D33 572 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 PRAMEF5Q5TYX0 476 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 TRAT1Q6PIZ9 186 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 CYP2G1PQ6ZSU1 146 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 C16orf82Q7Z2V1 217 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 ABHD12Q8N2K0 398 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 ZADH2Q8N4Q0 377 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 ITLN1Q8WWA0 313 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 IFI27L2Q9H2X8 130 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 FAM215AQ9Y5M1 114 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 PCNX1Q96RV3 2341 aa9.04□□□□□ -0.96
LIN54-207ENST00000508171 YPEL1O60688 119 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 CEACAM4O75871 244 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 KBTBD11O94819 623 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 IFNA10P01566 189 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 MZT1Q08AG7 82 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 CLEC12BQ2HXU8 276 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 OR4A16Q8NH70 328 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 YPEL2Q96QA6 119 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 GPR61Q9BZJ8 451 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 JPT1Q9UK76 154 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 RAI1Q7Z5J4 1906 aaPredicted RBP9.03□□□□□ -0.96
LIN54-207ENST00000508171 ZNF318Q5VUA4 2279 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 SMCO3A2RU48 225 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 PHOX2AO14813 284 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 GALR2O43603 387 aaPredicted RBP9.03□□□□□ -0.96
LIN54-207ENST00000508171 LHBP01229 141 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 CRYAAP02489 173 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 NPPCP23582 126 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 COL8A2P25067 703 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 CFHR2P36980 270 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 KLF3P57682 345 aaPredicted RBP9.03□□□□□ -0.96
LIN54-207ENST00000508171 CR1LQ2VPA4 569 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 BSXQ3C1V8 233 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 PYY3Q5JQD4 70 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 CDPF1Q6NVV7 123 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 OR51M1Q9H341 326 aa9.03□□□□□ -0.96
LIN54-207ENST00000508171 HEYLQ9NQ87 328 aaPredicted RBP9.03□□□□□ -0.96
LIN54-207ENST00000508171 GAR1Q9NY12 217 aaKnown RBP9.03□□□□□ -0.96
LIN54-207ENST00000508171 GVINP1Q7Z2Y8 2422 aa9.02□□□□□ -0.96
LIN54-207ENST00000508171 DYSFO75923 2080 aa9.02□□□□□ -0.96
LIN54-207ENST00000508171 TRBV24-1A0A075B6N3 115 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 TMEM250H0YL14 139 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 K7EM74 188 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 CDC34P49427 236 aaPredicted RBP9.02□□□□□ -0.97
LIN54-207ENST00000508171 TIMM23BQ5SRD1 257 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 OR51G1Q8NGK1 321 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 OR13D1Q8NGV5 346 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 TMEM170AQ8WVE7 144 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 PATZ1Q9HBE1 687 aaKnown RBP9.02□□□□□ -0.97
LIN54-207ENST00000508171 CALYQ9NYX4 217 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 WDR83OSQ9Y284 106 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 ZFHX2Q9C0A1 2572 aaPredicted RBP9.02□□□□□ -0.97
LIN54-207ENST00000508171 ZGRF1Q86YA3 2104 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 PIEZO2Q9H5I5 2752 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 C17orf112F2Z3M2 114 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 F2RL2O00254 374 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 OPN1MWP04001 364 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 PFN1P07737 140 aaKnown RBP9.02□□□□□ -0.97
LIN54-207ENST00000508171 OPN1MW2P0DN77 364 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 OPN1MW3P0DN78 364 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 GLRXP35754 106 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 UBE2G2P60604 165 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 SPCS3P61009 180 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 NKX6-1P78426 367 aaPredicted RBP9.02□□□□□ -0.97
LIN54-207ENST00000508171 RELBQ01201 579 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 C17orf58Q2M2W7 97 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 CT45A1Q5HYN5 189 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 TGIF2LYQ8IUE0 185 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 DEFB108BQ8NET1 73 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 CT45A3Q8NHU0 189 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 S1PR3Q99500 378 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 ELOVL1Q9BW60 279 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms