RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 J3QQQ9 107 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 TXNDC9O14530 226 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 COX7A2LO14548 114 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 RPS12P25398 132 aaKnown RBP1.19□□□□□ -2.22
LSM6-205ENST00000507449 CCR2P41597 374 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 RPL26P61254 145 aaKnown RBP1.19□□□□□ -2.22
LSM6-205ENST00000507449 TNFAIP6P98066 277 aaPredicted RBP1.19□□□□□ -2.22
LSM6-205ENST00000507449 GNA12Q03113 381 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 PRDX4Q13162 271 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 RSU1Q15404 277 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 LRRC75BQ2VPJ9 315 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 C1orf195Q5TG92 126 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 LRRN1Q6UXK5 716 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 OR13C8Q8NGS7 320 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 OR5J2Q8NH18 312 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 JOSD2Q8TAC2 188 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 ZNHIT6Q9NWK9 470 aaKnown RBP1.19□□□□□ -2.22
LSM6-205ENST00000507449 TAAR3PQ9P1P4 343 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 RPL26L1Q9UNX3 145 aaKnown RBP1.19□□□□□ -2.22
LSM6-205ENST00000507449 HHLA3Q9XRX5 114 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 SLX4Q8IY92 1834 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 ZNF532Q9HCE3 1301 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 TRAV41A0A0B4J266 112 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 OCM2P0CE71 109 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 CCL5P13501 91 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 RAP1GDS1P52306 607 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 HSP90B2PQ58FF3 399 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 PABPC1L2AQ5JQF8 200 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 FAM78BQ5VT40 261 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 OR10K2Q6IF99 312 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 ZNF550Q7Z398 422 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 SLC35E3Q7Z769 313 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 OR51T1Q8NGJ9 327 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 OR1L8Q8NGR8 309 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 PIGXQ8TBF5 258 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 VCX3BQ9H321 246 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 CXorf21Q9HAI6 301 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 NKIRAS1Q9NYS0 192 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 MPDZO75970 2070 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 GBF1Q92538 1859 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 DENND4BO75064 1496 aaPredicted RBP1.18□□□□□ -2.22
LSM6-205ENST00000507449 GRIN2BQ13224 1484 aa1.18□□□□□ -2.22
LSM6-205ENST00000507449 A8MUN3 132 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 LST1O00453 97 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 SLC16A4O15374 487 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 PLA2G10O15496 165 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 UCHL1P09936 223 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 DEFA4P12838 97 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 MAP2K4P45985 399 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 IDH3GP51553 393 aaPredicted RBP1.17□□□□□ -2.22
LSM6-205ENST00000507449 ERHP84090 104 aaKnown RBP1.17□□□□□ -2.22
LSM6-205ENST00000507449 MIAQ16674 131 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 TNFAIP8L3Q5GJ75 292 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 SFXN4Q6P4A7 337 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 GPR32P1Q8NGA4 272 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 RAB8BQ92930 207 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 XPNPEP1Q9NQW7 623 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 FGFR1OP2Q9NVK5 253 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 USE1Q9NZ43 259 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 C3orf18Q9UK00 162 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 PXMP4Q9Y6I8 212 aa1.17□□□□□ -2.22
LSM6-205ENST00000507449 RGS12O14924 1447 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 KDM5BQ9UGL1 1544 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 WDR90Q96KV7 1748 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 LRRN3E7EW58 273 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 PGLYRP1O75594 196 aaPredicted RBP1.16□□□□□ -2.22
LSM6-205ENST00000507449 NSA2O95478 260 aaKnown RBP1.16□□□□□ -2.22
LSM6-205ENST00000507449 KRT75O95678 551 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 TFPTP0C1Z6 253 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 ALDH3A1P30838 453 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 CA5AP35218 305 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 SLCO1A2P46721 670 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 FXYD7P58549 80 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 TAS2R20P59543 309 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 CLVS2Q5SYC1 327 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 CD200R1LQ6Q8B3 271 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 HIST2H3AQ71DI3 136 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 LRRC28Q86X40 367 aaPredicted RBP1.16□□□□□ -2.22
LSM6-205ENST00000507449 LHFPL5Q8TAF8 219 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 ASB17Q8WXJ9 295 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 TESCQ96BS2 214 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 IMMP2LQ96T52 175 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 PRELID1Q9Y255 219 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 NOSIPQ9Y314 301 aaKnown RBP1.16□□□□□ -2.22
LSM6-205ENST00000507449 SCN9AQ15858 1988 aa1.16□□□□□ -2.22
LSM6-205ENST00000507449 NCKAP5O14513 1909 aa1.15□□□□□ -2.22
LSM6-205ENST00000507449 IGHV3-64A0A075B6Q5 118 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 TMEM269A0A1B0GVZ9 245 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 OR4C45A6NMZ5 311 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 DISC1C4P0D8 188 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 APOEP02649 317 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 LGALS1P09382 135 aaKnown RBP1.15□□□□□ -2.23
LSM6-205ENST00000507449 RPL28P46779 137 aaKnown RBP1.15□□□□□ -2.23
LSM6-205ENST00000507449 NAA20P61599 178 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 RPL30P62888 115 aaKnown RBP1.15□□□□□ -2.23
LSM6-205ENST00000507449 SLC38A11Q08AI6 406 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 SLC51BQ86UW2 128 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 GID4Q8IVV7 300 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 IQCF2Q8IXL9 164 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 SLC22A24Q8N4F4 322 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms