RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SCGB2A2Q13296 93 aa11.33□□□□□ -0.6
RNF4-208ENST00000507247 TMEM268Q5VZI3 342 aa11.33□□□□□ -0.6
RNF4-208ENST00000507247 TMEM219Q86XT9 240 aa11.33□□□□□ -0.6
RNF4-208ENST00000507247 VKORC1L1Q8N0U8 176 aa11.33□□□□□ -0.6
RNF4-208ENST00000507247 OSR1Q8TAX0 266 aaPredicted RBP11.33□□□□□ -0.6
RNF4-208ENST00000507247 MITD1Q8WV92 249 aa11.33□□□□□ -0.6
RNF4-208ENST00000507247 R3HDM4Q96D70 268 aa11.33□□□□□ -0.6
RNF4-208ENST00000507247 SEC22AQ96IW7 307 aa11.33□□□□□ -0.6
RNF4-208ENST00000507247 GPN1Q9HCN4 374 aaPredicted RBP11.33□□□□□ -0.6
RNF4-208ENST00000507247 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.6
RNF4-208ENST00000507247 SNRPGP15A8MWD9 76 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 FAM157CP0CG43 387 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 G6PCP35575 357 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 MMDQ15546 238 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 POU2AF1Q16633 256 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 Q6ZNX1 250 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 LYZL2Q7Z4W2 148 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 ZNF695Q8IW36 515 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 LGI3Q8N145 548 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 C12orf45Q8N5I9 185 aaPredicted RBP11.32□□□□□ -0.6
RNF4-208ENST00000507247 SLC35G3Q8N808 338 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 LRTM2Q8N967 370 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 OR5R1Q8NH85 324 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 SSMEM1Q8WWF3 244 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 RBPMSQ93062 196 aaKnown RBP11.32□□□□□ -0.6
RNF4-208ENST00000507247 IL22RA2Q969J5 263 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 DUX5Q96PT3 197 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 RNF5Q99942 180 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 PLSCR3Q9NRY6 295 aa11.32□□□□□ -0.6
RNF4-208ENST00000507247 A0A0B4J2A0 478 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 A0A0G2JRQ6 117 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 CHST1O43916 411 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 CREBL2O60519 120 aaPredicted RBP11.31□□□□□ -0.6
RNF4-208ENST00000507247 OR2F2O95006 317 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 NDUFA3O95167 84 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 KRASP01116 189 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 CRYGBP07316 175 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 SAA1P0DJI8 122 aaPredicted RBP11.31□□□□□ -0.6
RNF4-208ENST00000507247 NQO2P16083 231 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 LGALS7P47929 136 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 SRPXP78539 464 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 PSG5Q15238 335 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 NPBQ8NG41 125 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 COQ8AQ8NI60 647 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 RHOVQ96L33 236 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
RNF4-208ENST00000507247 TSNAXQ99598 290 aaKnown RBP11.31□□□□□ -0.6
RNF4-208ENST00000507247 PHB2Q99623 299 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 OR51J1Q9H342 316 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 SHPKQ9UHJ6 478 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 VPREB3Q9UKI3 123 aa11.31□□□□□ -0.6
RNF4-208ENST00000507247 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
RNF4-208ENST00000507247 BTBD17A6NE02 478 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 DNAJC9-AS1A6NH13 148 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 RRHO14718 337 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 NBR2O15453 112 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 SLC25A17O43808 307 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 ADAP1O75689 374 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 HRASP01112 189 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 P0C879 139 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 AKR1C2P52895 323 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 IZUMO4Q1ZYL8 232 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 C2orf68Q2NKX9 166 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 OR4A47Q6IF82 309 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 PUSL1Q8N0Z8 303 aaKnown RBP11.3□□□□□ -0.6
RNF4-208ENST00000507247 Q8N9W7 124 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 DMBX1Q8NFW5 382 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 FBXL15Q9H469 300 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 PITPNC1Q9UKF7 332 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 POMT1Q9Y6A1 747 aa11.3□□□□□ -0.6
RNF4-208ENST00000507247 TRAV3A0A0B4J244 114 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 DUXBA0A1W2PPF3 345 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 SPDEFO95238 335 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
RNF4-208ENST00000507247 HOXB5P09067 269 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 UBE2KP61086 200 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 ERVK-16P61578 105 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 MRGPRG-AS1Q2M3A8 158 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 NMSQ5H8A3 153 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 RBMS3Q6XE24 437 aaKnown RBP11.29□□□□□ -0.6
RNF4-208ENST00000507247 FAM71E2Q8N5Q1 922 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 TMEM86BQ8N661 226 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 UXS1Q8NBZ7 420 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 ZNF418Q8TF45 676 aaPredicted RBP11.29□□□□□ -0.6
RNF4-208ENST00000507247 GPR146Q96CH1 333 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
RNF4-208ENST00000507247 MOB4Q9Y3A3 225 aa11.29□□□□□ -0.6
RNF4-208ENST00000507247 A0A1B0GVG6 124 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 NCBP2LA6PVI3 153 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms