RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SIGLEC9Q9Y336 463 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 RNF114Q9Y508 228 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 LINC00473A8K010 186 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 CYB5BO43169 146 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 CHST1O43916 411 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 PEX14O75381 377 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 ACTL6BO94805 426 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 OR2A4O95047 310 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 CRYZL1O95825 349 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 OPN1MWP04001 364 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 IGKV1-16P04430 117 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 AMY1AP04745 511 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 SERPINE2P07093 398 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 ELANEP08246 267 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 OPN1MW2P0DN77 364 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 OPN1MW3P0DN78 364 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 IL7P13232 177 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 PGAM2P15259 253 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 UCP1P25874 307 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 PIGPP57054 158 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 FXYD4P59646 89 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 DEFA1P59665 94 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 DEFA3P59666 94 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 AWAT1Q58HT5 328 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 C12orf54Q6X4T0 127 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 SLC35E3Q7Z769 313 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 SGPP2Q8IWX5 399 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 SPAG16Q8N0X2 631 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 PUSL1Q8N0Z8 303 aaKnown RBP6.72□□□□□ -1.33
PDGFC-205ENST00000506880 OR51S1Q8NGJ8 323 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 OR5M8Q8NGP6 311 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 SGMS2Q8NHU3 365 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 TMEM167AQ8TBQ9 72 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 WIPF2Q8TF74 440 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-205ENST00000506880 RHOVQ96L33 236 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 OR2A7Q96R45 310 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 SPIN2AQ99865 258 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 SPIN2BQ9BPZ2 258 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 HRASLSQ9HDD0 168 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 CCL28Q9NRJ3 127 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 ZFP57Q9NU63 452 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF257Q9Y2Q1 563 aa6.72□□□□□ -1.33
PDGFC-205ENST00000506880 FBN1P35555 2871 aaKnown RBP6.72□□□□□ -1.33
PDGFC-205ENST00000506880 CRYM-AS1A6NIL9 109 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 M0QYG6 137 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 FCGR3BO75015 233 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 UPK1BO75841 260 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 KBTBD11O94819 623 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 DHFRP00374 187 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 IGLV2-23P01705 113 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 CRYGBP07316 175 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 IL6RP08887 468 aaPredicted RBP6.71□□□□□ -1.34
PDGFC-205ENST00000506880 SLC25A6P12236 298 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 PRB3Q04118 309 aaPredicted RBP6.71□□□□□ -1.34
PDGFC-205ENST00000506880 FOXE3Q13461 319 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 ASAH1Q13510 395 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 PLGLAQ15195 96 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 PSG5Q15238 335 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 LY6EQ16553 131 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 KLK9Q2XQG4 91 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 SCGB2B2Q4G0G5 96 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 ZNF57Q68EA5 555 aaPredicted RBP6.71□□□□□ -1.34
PDGFC-205ENST00000506880 TEX38Q6PEX7 206 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.71□□□□□ -1.34
PDGFC-205ENST00000506880 LRTM2Q8N967 370 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 OR4X2Q8NGF9 303 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 OR1L6Q8NGR2 347 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 OR13C8Q8NGS7 320 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 OR5B3Q8NH48 314 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 ATP6V0BQ99437 205 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 SDHCQ99643 169 aaPredicted RBP6.71□□□□□ -1.34
PDGFC-205ENST00000506880 TMEM222Q9H0R3 208 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 OR51J1Q9H342 316 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 SLA2Q9H6Q3 261 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 SERTAD4Q9NUC0 356 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 MCUBQ9NWR8 336 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 COA4Q9NYJ1 87 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 METTL1Q9UBP6 276 aaKnown RBP6.71□□□□□ -1.34
PDGFC-205ENST00000506880 KLK9Q9UKQ9 250 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 PRNDQ9UKY0 176 aa6.71□□□□□ -1.34
PDGFC-205ENST00000506880 SOX21Q9Y651 276 aaPredicted RBP6.71□□□□□ -1.34
PDGFC-205ENST00000506880 C3orf85A0A1B0GTC6 90 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 MARCH11A6NNE9 402 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 INS-IGF2F8WCM5 200 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 LCE2BO14633 110 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 LYRM1O43325 122 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 NDUFB6O95139 128 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 CDS2O95674 445 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 IGHG4P01861 327 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 VDAC1P21796 283 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 MECP2P51608 486 aaKnown RBP6.7□□□□□ -1.34
PDGFC-205ENST00000506880 ATP5IP56385 69 aaPredicted RBP6.7□□□□□ -1.34
PDGFC-205ENST00000506880 RPL8P62917 257 aaKnown RBP6.7□□□□□ -1.34
PDGFC-205ENST00000506880 RELBQ01201 579 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 PRSS8Q16651 343 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 AARDQ4LEZ3 155 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 ARSJQ5FYB0 599 aaPredicted RBP6.7□□□□□ -1.34
PDGFC-205ENST00000506880 FAM53AQ6NSI3 398 aaPredicted RBP6.7□□□□□ -1.34
PDGFC-205ENST00000506880 TBC1D26Q86UD7 250 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 ZNF429Q86V71 674 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms