RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ADA2Q9NZK5 511 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 PEF1Q9UBV8 284 aaKnown RBP3.35□□□□□ -1.87
HERC4-213ENST00000506515 TENM3Q9P273 2699 aa3.35□□□□□ -1.87
HERC4-213ENST00000506515 IGHV3-15A0A0B4J1V0 119 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 IGHV3-72A0A0B4J1Y9 119 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 IGHV2OR16-5A0A0B4J2B6 119 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 LOC102725191A0A1B0GVB3 256 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 FAM159BA6NKW6 160 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 MANBAO00462 879 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 FAAHO00519 579 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 FSTL3O95633 263 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 IGHMP01871 453 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 PMCHP20382 165 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 GUCA1AP43080 201 aaPredicted RBP3.34□□□□□ -1.87
HERC4-213ENST00000506515 SERPINB9P50453 376 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 KRTAP10-8P60410 259 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 HPCAP84074 193 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 DR1Q01658 176 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 ZNF117Q03924 483 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 C1DQ13901 141 aaKnown RBP3.34□□□□□ -1.87
HERC4-213ENST00000506515 KCNJ8Q15842 424 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 ZNF141Q15928 474 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 C5orf64Q2M2E5 130 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 OR2T5Q6IEZ7 315 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 NOXRED1Q6NXP6 359 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 SLC25A34Q6PIV7 304 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 MRPL21Q7Z2W9 205 aaKnown RBP3.34□□□□□ -1.87
HERC4-213ENST00000506515 NEGR1Q7Z3B1 354 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 OSR2Q8N2R0 312 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 GATSQ8NAP1 163 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 OR2T29Q8NH02 315 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 C22orf15Q8WYQ4 148 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 CCL17Q92583 94 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 RCN3Q96D15 328 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 AGMATQ9BSE5 352 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 ZNF2Q9BSG1 426 aaPredicted RBP3.34□□□□□ -1.87
HERC4-213ENST00000506515 DPY30Q9C005 99 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 TOLLIPQ9H0E2 274 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 C16orf95Q9H693 158 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 POFUT2Q9Y2G5 429 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 INSIG2Q9Y5U4 225 aa3.34□□□□□ -1.87
HERC4-213ENST00000506515 CENPVL3A0A0U1RRI6 287 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 ISPDA4D126 451 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 H3BSA7 217 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 TAAR5O14804 337 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 PLXNB1O43157 2135 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 SCN2BO60939 215 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 IGKV1D-16P01601 117 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 HMGN2P05204 90 aaKnown RBP3.33□□□□□ -1.88
HERC4-213ENST00000506515 TFPTP0C1Z6 253 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 NEFHP12036 1026 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 ZNF35P13682 527 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 LCN2P80188 198 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 SLC36A2Q495M3 483 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 YIF1BQ5BJH7 314 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 DEFB121Q5J5C9 76 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 TEX30Q5JUR7 227 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 ULK3Q6PHR2 472 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 LRRC8AQ8IWT6 810 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 ZCCHC24Q8N2G6 241 aaKnown RBP3.33□□□□□ -1.88
HERC4-213ENST00000506515 DEDD2Q8WXF8 326 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 OR5P2Q8WZ92 322 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 CDS1Q92903 461 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 SDF2Q99470 211 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 C21orf62Q9NYP8 219 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 UBAP1Q9NZ09 502 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 TAAR3PQ9P1P4 343 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 PCTPQ9UKL6 214 aa3.33□□□□□ -1.88
HERC4-213ENST00000506515 IGLV3-9A0A075B6K5 115 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 TMED7-TICAM2A0A0A6YYA0 188 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 KIR2DS1A0A191URI9 304 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 LYNX1G3V0Z9 82 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 RNASEK-C17orf49H0YIS7 233 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 NDUFA2O43678 99 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 MT-ND4P03905 459 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 LYNX1P0DP58 116 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 CD79AP11912 226 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 PRPS1L1P21108 318 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 IDH2P48735 452 aaKnown RBP3.32□□□□□ -1.88
HERC4-213ENST00000506515 OR2B8PP59922 312 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 CCL8P80075 99 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 IFITM3Q01628 133 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 SKP2Q13309 424 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 TOMM34Q15785 309 aaPredicted RBP3.32□□□□□ -1.88
HERC4-213ENST00000506515 PRSS8Q16651 343 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 TBC1D28Q2M2D7 210 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 ARHGAP11BQ3KRB8 267 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 LRRC28Q86X40 367 aaPredicted RBP3.32□□□□□ -1.88
HERC4-213ENST00000506515 OR4M1Q8NGD0 313 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 MFSD8Q8NHS3 518 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 CDC26Q8NHZ8 85 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 SFXN5Q8TD22 340 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 C17orf50Q8WW18 174 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 KCNS1Q96KK3 526 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 RHOXF2Q9BQY4 288 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 SULT4A1Q9BR01 284 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 REEP1Q9H902 201 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 LZTFL1Q9NQ48 299 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms