RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TRIQKQ629K1 86 aa7.79□□□□□ -1.16
NR1I3-220ENST00000505005 HSD17B13Q7Z5P4 300 aaPredicted RBP7.79□□□□□ -1.16
NR1I3-220ENST00000505005 GVQW1Q8N7I0 195 aa7.79□□□□□ -1.16
NR1I3-220ENST00000505005 TMEM229BQ8NBD8 167 aa7.79□□□□□ -1.16
NR1I3-220ENST00000505005 WIPF2Q8TF74 440 aaPredicted RBP7.79□□□□□ -1.16
NR1I3-220ENST00000505005 SPIN2AQ99865 258 aa7.79□□□□□ -1.16
NR1I3-220ENST00000505005 SPIN2BQ9BPZ2 258 aa7.79□□□□□ -1.16
NR1I3-220ENST00000505005 ZNF2Q9BSG1 426 aaPredicted RBP7.79□□□□□ -1.16
NR1I3-220ENST00000505005 FKBP11Q9NYL4 201 aa7.79□□□□□ -1.16
NR1I3-220ENST00000505005 ELF5Q9UKW6 265 aaPredicted RBP7.79□□□□□ -1.16
NR1I3-220ENST00000505005 SIGLEC9Q9Y336 463 aa7.79□□□□□ -1.16
NR1I3-220ENST00000505005 IGKV1D-8A0A087WSZ0 117 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 TRAV41A0A0B4J266 112 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 PROP1O75360 226 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 CRYZL1O95825 349 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 PF4P02776 101 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 NQO2P16083 231 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 HRH1P35367 487 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 SURF2Q15527 256 aaPredicted RBP7.78□□□□□ -1.16
NR1I3-220ENST00000505005 FAM53AQ6NSI3 398 aaPredicted RBP7.78□□□□□ -1.16
NR1I3-220ENST00000505005 RNF152Q8N8N0 203 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 CCDC71LQ8N9Z2 235 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 ABHD5Q8WTS1 349 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 DDB2Q92466 427 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 SNAPC3Q92966 411 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 TRIM63Q969Q1 353 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 R3HDM4Q96D70 268 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 UBE2E2Q96LR5 201 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 PRRT1Q99946 306 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 PLEKHA2Q9HB19 425 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 PGPEP1Q9NXJ5 209 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 COMMD9Q9P000 198 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 SCP2D1Q9UJQ7 156 aa7.78□□□□□ -1.16
NR1I3-220ENST00000505005 IGHV7-81A0A0B4J1V7 117 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 SLC25A17O43808 307 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 FCGR3BO75015 233 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 OR2A4O95047 310 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 PMP2P02689 132 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 IGKV1-16P04430 117 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 AKAIN1P0CW23 69 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 F2RP25116 425 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 HLA-DMAP28067 261 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 MYCNOSP40205 109 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 RFX2P48378 723 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 INPP1P49441 399 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 FXYD4P59646 89 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 CX3CL1P78423 397 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 IFITM3Q01628 133 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 FXYD3Q14802 87 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 OXA1LQ15070 435 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 KHDC1LQ5JSQ8 128 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 AADACL3Q5VUY0 350 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 MZT2BQ6NZ67 158 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 GLDNQ6ZMI3 551 aaPredicted RBP7.77□□□□□ -1.17
NR1I3-220ENST00000505005 SPAG16Q8N0X2 631 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 DRAXINQ8NBI3 349 aaPredicted RBP7.77□□□□□ -1.17
NR1I3-220ENST00000505005 TERB2Q8NHR7 220 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 ARPC1AQ92747 370 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 DPF1Q92782 380 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 OR2A7Q96R45 310 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 ABHD1Q96SE0 405 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 CITED2Q99967 270 aaPredicted RBP7.77□□□□□ -1.17
NR1I3-220ENST00000505005 SRSF8Q9BRL6 282 aaKnown RBP7.77□□□□□ -1.17
NR1I3-220ENST00000505005 THAP7Q9BT49 309 aaPredicted RBP7.77□□□□□ -1.17
NR1I3-220ENST00000505005 PARP12Q9H0J9 701 aaKnown RBP7.77□□□□□ -1.17
NR1I3-220ENST00000505005 FBXL15Q9H469 300 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 PARP11Q9NR21 331 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 FOXA2Q9Y261 457 aaPredicted RBP7.77□□□□□ -1.17
NR1I3-220ENST00000505005 NUBP2Q9Y5Y2 271 aa7.77□□□□□ -1.17
NR1I3-220ENST00000505005 NAP1L6A6NFF2 107 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 CENPXA8MT69 81 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 NUDT19A8MXV4 375 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 MPPED1O15442 326 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 RAB3DO95716 219 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 CD74P04233 296 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 CD28P10747 220 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 RPL23AP62750 156 aaKnown RBP7.76□□□□□ -1.17
NR1I3-220ENST00000505005 BAK1Q16611 211 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 POU2AF1Q16633 256 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 TRIM16LQ309B1 348 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 NSUN5P1Q3KNT7 163 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 STEAP1BQ6NZ63 245 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 C5orf24Q7Z6I8 188 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 ZNF695Q8IW36 515 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 OR1L6Q8NGR2 347 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 RCC1LQ96I51 464 aaKnown RBP7.76□□□□□ -1.17
NR1I3-220ENST00000505005 USMG5Q96IX5 58 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 RHOVQ96L33 236 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 PHB2Q99623 299 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 CCL28Q9NRJ3 127 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 BET1LQ9NYM9 111 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 THYN1Q9P016 225 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 COPZ2Q9P299 210 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 VSIG4Q9Y279 399 aa7.76□□□□□ -1.17
NR1I3-220ENST00000505005 MEIS3P1A6NDR6 274 aa7.75□□□□□ -1.17
NR1I3-220ENST00000505005 LINC00473A8K010 186 aa7.75□□□□□ -1.17
NR1I3-220ENST00000505005 ATP6V0E1O15342 81 aa7.75□□□□□ -1.17
NR1I3-220ENST00000505005 SNAPC5O75971 98 aa7.75□□□□□ -1.17
NR1I3-220ENST00000505005 CA2P00918 260 aa7.75□□□□□ -1.17
NR1I3-220ENST00000505005 IGLV1-40P01703 118 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms