RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SPRY3O43610 288 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 CHST1O43916 411 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 ZNF253O75346 499 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 DXOO77932 396 aaKnown RBP3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 TNFSF15O95150 251 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 EML2O95834 649 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 CELA3BP08861 270 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 CST2P09228 141 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 ZGLP1P0C6A0 271 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 CT45A10P0DMU9 189 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 ZNF32P17041 273 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 FUT3P21217 361 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 RND2P52198 227 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 LGALS4P56470 323 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 PPP1CBP62140 327 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 RAB1AP62820 205 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 STUMQ69YW2 141 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 Q6ZN92 141 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 OR2L13Q8N349 312 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 ARHGEF39Q8N4T4 335 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 RNF183Q96D59 192 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 FBLN5Q9UBX5 448 aa3.14□□□□□ -1.91
PCDH11X-208ENST00000504220 GSTZ1O43708 216 aaPredicted RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 HYPMO75409 117 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 CD40P25942 277 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 THBS3P49746 956 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 NANOS3P60323 173 aaKnown RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 CKS1BP61024 79 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 DPTQ07507 201 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 DIAPH2-AS1Q14236 149 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 IZUMO4Q1ZYL8 232 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ACOT6Q3I5F7 207 aaPredicted RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ZNF562Q6V9R5 426 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 PIP4P1Q86T03 277 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 CDC20BQ86Y33 519 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 LRRC75AQ8NAA5 344 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 VN1R17PQ8TDU5 208 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 JMJD8Q96S16 334 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 DNAJB12Q9NXW2 375 aaKnown RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 TECTAO75443 2155 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 FREM3P0C091 2139 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 MYO9AB2RTY4 2548 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 NCOR2Q9Y618 2525 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SETD2Q9BYW2 2564 aaPredicted RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 DOCK11Q5JSL3 2073 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 IGHV3-21A0A0B4J1V1 117 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 A0A1B0GV72 72 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 C17orf51A8MQB3 221 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SH2D1BO14796 132 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ZNF737O75373 536 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SCGB2A1O75556 95 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SFT2D2O95562 160 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 CD55P08174 381 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SRD5A2P31213 254 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SSTR5P35346 364 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 KIR2DL1P43626 348 aaPredicted RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 DYNLT3P51808 116 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 DLK1P80370 383 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 C3AR1Q16581 482 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 TBC1D28Q2M2D7 210 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 TIMM23BQ5SRD1 257 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 DMKNQ6E0U4 476 aaPredicted RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ZNF770Q6IQ21 691 aaPredicted RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 TPRX1Q8N7U7 411 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 FER1L6-AS1Q8NA97 138 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 NHLRC2Q8NBF2 726 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 MORN4Q8NDC4 146 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 RNF133Q8WVZ7 376 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 DPF1Q92782 380 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 RAX2Q96IS3 184 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 OXGR1Q96P68 337 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 S1PR3Q99500 378 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 GFI1Q99684 422 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 FOXB1Q99853 325 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 RNF126Q9BV68 326 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 QTRT1Q9BXR0 403 aaKnown RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 LPAR3Q9UBY5 353 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ERG28Q9UKR5 140 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SELENOKQ9Y6D0 94 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 RALGAPA1Q6GYQ0 2036 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 A0A087WWC5 75 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 TMSB15BA0A087X1C1 80 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 RBFOX3A6NFN3 312 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 J3QRE1 110 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 NKX2-2O95096 273 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 OR5AL1P0C617 328 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 LYL1P12980 280 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ORM2P19652 201 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 KLK2P20151 261 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ZNF137PP52743 207 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SUMO3P55854 103 aaPredicted RBP3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 TMPRSS3P57727 454 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 HLA-DRB3P79483 266 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 COL10A1Q03692 680 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 SLC38A11Q08AI6 406 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 HIST3H3Q16695 136 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 IQCJQ1A5X6 159 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ZNF766Q5HY98 468 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 EMC4Q5J8M3 183 aa3.13□□□□□ -1.91
PCDH11X-208ENST00000504220 ERASQ7Z444 233 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms