RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TEX45Q8NA69 505 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.74□□□□□ -1.33
CCDC171-209ENST00000498725 OR6M1Q8NGM8 313 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 C11orf45Q8TAV5 145 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 C2CD4CQ8TF44 421 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 CCDC140Q96MF4 163 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 FYTTD1Q96QD9 318 aaKnown RBP6.74□□□□□ -1.33
CCDC171-209ENST00000498725 SPIN2AQ99865 258 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 SPIN2BQ9BPZ2 258 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 UQCC2Q9BRT2 126 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 Q9N2K0 584 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 GHRLQ9UBU3 117 aa6.74□□□□□ -1.33
CCDC171-209ENST00000498725 TRDCB7Z8K6 153 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 ATP8B1O43520 1251 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 WBP4O75554 376 aaKnown RBP6.73□□□□□ -1.33
CCDC171-209ENST00000498725 CIB2O75838 187 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 REG1AP05451 166 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 UBBP0CG47 229 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 SAA1P0DJI8 122 aaPredicted RBP6.73□□□□□ -1.33
CCDC171-209ENST00000498725 RPA2P15927 270 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 ATF4P18848 351 aaPredicted RBP6.73□□□□□ -1.33
CCDC171-209ENST00000498725 CELP19835 753 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 MED21Q13503 144 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 P2RY14Q15391 338 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 MED22Q15528 200 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 ZNF124Q15973 351 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 IGSF11Q5DX21 431 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 FAM209BQ5JX69 171 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 RBM48Q5RL73 367 aaKnown RBP6.73□□□□□ -1.33
CCDC171-209ENST00000498725 OR4A47Q6IF82 309 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 SLC25A42Q86VD7 318 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 APRG1Q8IVJ8 170 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 VKORC1L1Q8N0U8 176 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 MAFIPQ8WZ33 124 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 RARRES2Q99969 163 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 CMSS1Q9BQ75 279 aaKnown RBP6.73□□□□□ -1.33
CCDC171-209ENST00000498725 TM2D1Q9BX74 207 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 RIMS4Q9H426 269 aaPredicted RBP6.73□□□□□ -1.33
CCDC171-209ENST00000498725 MGAT4AQ9UM21 535 aa6.73□□□□□ -1.33
CCDC171-209ENST00000498725 TRBV6-6A0A0A6YYG2 114 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 MFSD2BA6NFX1 497 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 LINC00473A8K010 186 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 A8MWP6 167 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 M0R2N4 97 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 RAB27BO00194 218 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 RRASP10301 218 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 MAP2K4P45985 399 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 CDK10Q15131 360 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 ODF3L2Q3SX64 289 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 GLT8D1Q68CQ7 371 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 MMD2Q8IY49 270 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 OR10J5Q8NHC4 309 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 EEF1AKMT3Q96AZ1 226 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 TMEM80Q96HE8 168 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 ARHGAP5-AS1Q96IT6 56 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 PECRQ9BY49 303 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 MFFQ9GZY8 342 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 LPAR5Q9H1C0 372 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 MAP6D1Q9H9H5 199 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 C12orf4Q9NQ89 552 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 APLNQ9ULZ1 77 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 DIMT1Q9UNQ2 313 aaKnown RBP6.72□□□□□ -1.33
CCDC171-209ENST00000498725 ZNF257Q9Y2Q1 563 aa6.72□□□□□ -1.33
CCDC171-209ENST00000498725 IGHV3OR16-8A0A075B7F1 116 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 TRAV25A0A0B4J276 109 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 KIR2DL5BA0A0G2JN68 375 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 KIR2DL5BA0A0G2JPC4 375 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 PRSS29PA6NIE9 313 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 TMEM14DPA8MWL7 114 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 TEX22C9J3V5 150 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 E7EUB6 86 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF207O43670 478 aaKnown RBP6.71□□□□□ -1.34
CCDC171-209ENST00000498725 FCGR3BO75015 233 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 CLEC3BP05452 202 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 GSTT2P0CG29 244 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 GSTT2BP0CG30 244 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 MYOD1P15172 320 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 AREGP15514 252 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 SRMP19623 302 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 GPR183P32249 361 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 RPL27AP46776 148 aaKnown RBP6.71□□□□□ -1.34
CCDC171-209ENST00000498725 TMEM50BP56557 158 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 TPBGQ13641 420 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 C1orf100Q5SVJ3 147 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 LINC00336Q6ZUF6 198 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 LRRTM1Q86UE6 522 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 KIR2DL5AQ8N109 375 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 OR4A4PQ8NGN8 299 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 OR11H2Q8NH07 326 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 KIR2DL5BQ8NHK3 375 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 CD300LFQ8TDQ1 290 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 GALNT14Q96FL9 552 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 FANCD2OSQ96PS1 177 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 URM1Q9BTM9 101 aaKnown RBP6.71□□□□□ -1.34
CCDC171-209ENST00000498725 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.34
CCDC171-209ENST00000498725 IGKV3-7A0A075B6H7 116 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 IRGMA1A4Y4 181 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 FABP7O15540 132 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 CREBL2O60519 120 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms