RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 ZDHHC16Q969W1 377 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 NPCDR1Q9BY65 106 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 IQCF6A8MYZ5 107 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 C11orf94C9JXX5 98 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 PSPNO60542 156 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 ZG16O60844 167 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 HAND1O96004 215 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 TFF1P04155 84 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 P0C879 139 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 KCNIP4Q6PIL6 250 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 FAM214BQ7L5A3 538 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 ZNF808Q8N4W9 903 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-206ENST00000498614 KLF14Q8TD94 323 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-206ENST00000498614 MBNL3Q9NUK0 354 aaKnown RBP13.68□□□□□ -0.22
COL6A1-206ENST00000498614 DSPP15924 2871 aaKnown RBP13.68□□□□□ -0.22
COL6A1-206ENST00000498614 ANKRD11Q6UB99 2663 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-206ENST00000498614 LRRC30A6NM36 301 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 RNF212BA8MTL3 300 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 MLNRO43193 412 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 RPL15P61313 204 aaKnown RBP13.67□□□□□ -0.22
COL6A1-206ENST00000498614 SPINK9Q5DT21 86 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 FDCSPQ8NFU4 85 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 OR10P1Q8NGE3 313 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 CBLN4Q9NTU7 201 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 FKBP11Q9NYL4 201 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 MSRB2Q9Y3D2 182 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 DIDO1Q9BTC0 2240 aaKnown RBP13.67□□□□□ -0.22
COL6A1-206ENST00000498614 CACNA1GO43497 2377 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 S1PR2O95136 353 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 SCGB1D1O95968 90 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 MSMO1Q15800 293 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 VWA1Q6PCB0 445 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 LINC01551Q86U37 167 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 TMEM256Q8N2U0 113 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 FZR1Q9UM11 496 aa13.67□□□□□ -0.22
COL6A1-206ENST00000498614 A0A0U1RQK1 487 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 ZNF320A2RRD8 509 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 NUPR1O60356 82 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 RAB4BP61018 213 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 GNB1P62873 340 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 Q6ZT83 130 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 ZNF709Q8N972 641 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 DTD1Q8TEA8 209 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 DERL1Q9BUN8 251 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 OR2D2Q9H210 308 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 POLR3KQ9Y2Y1 108 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-206ENST00000498614 PRR14LQ5THK1 2151 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 OR3A1P47881 315 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 ATP5G3P48201 142 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 UBE2G2P60604 165 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 LCN2P80188 198 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 INO80CQ6PI98 192 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-206ENST00000498614 ZNF645Q8N7E2 425 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-206ENST00000498614 TRAPPC1Q9Y5R8 145 aa13.66□□□□□ -0.22
COL6A1-206ENST00000498614 PGPEP1LA6NFU8 196 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 C1QTNF9P0C862 333 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 CASP6P55212 293 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 BRWD1-AS2P59051 145 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 GCSAMLQ5JQS6 135 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 TMEM144Q7Z5S9 345 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 ZNF114Q8NC26 417 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 PIEZO2Q9H5I5 2752 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 C17orf98A8MV24 154 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 IGHG3P01860 377 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 CDC34P49427 236 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-206ENST00000498614 AESQ08117 197 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 VWC2Q2TAL6 325 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 PRAMEF6Q5VXH4 476 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 C9orf106Q8NAJ2 232 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 FAM122AQ96E09 287 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 KCNIP1Q9NZI2 227 aa13.65□□□□□ -0.22
COL6A1-206ENST00000498614 TMEM210A6NLX4 147 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 C12orf77C9JDV5 145 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 NDUFB4O95168 129 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 G0S2P27469 103 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 GCH1P30793 250 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 HOXC12P31275 282 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 ERVFC1-1P60608 527 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 EIF4EBP1Q13541 118 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-206ENST00000498614 FIP1L1Q6UN15 594 aaKnown RBP13.64□□□□□ -0.23
COL6A1-206ENST00000498614 C11orf53Q8IXP5 236 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 OR52L2PQ8NGH6 319 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 PXMP4Q9Y6I8 212 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 TRAV38-1A0A0B4J264 116 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 TMEM30CPA0ZSE6 113 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 KIR2DL2P43627 348 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-206ENST00000498614 C1orf194Q5T5A4 169 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 CST9LP1Q5W188 147 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 BTNL3Q6UXE8 466 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 Q8N7P7 452 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 WDR31Q8NA23 367 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 HES4Q9HCC6 221 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 NAGKQ9UJ70 344 aa13.64□□□□□ -0.23
COL6A1-206ENST00000498614 ZNF891A8MT65 544 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-206ENST00000498614 LINC00205P59089 165 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 GUSBP1Q15486 140 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 Q6ZR03 302 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 TCF23Q7RTU1 214 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms