RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TMEM222Q9H0R3 208 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 GAL3ST2Q9H3Q3 398 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 UBTD1Q9HAC8 227 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 SDHAF2Q9NX18 166 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 CALYQ9NYX4 217 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 IDI2-AS1Q9NZ38 188 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 GNG12Q9UBI6 72 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 CLN8Q9UBY8 286 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 KCNS2Q9ULS6 477 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 GAB2Q9UQC2 676 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 TMED3Q9Y3Q3 217 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 LINC00312Q9Y6C7 94 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 PRR14LQ5THK1 2151 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 ZANQ9Y493 2812 aa4.35□□□□□ -1.71
HMGXB4-208ENST00000498325 AKAP6Q13023 2319 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 HRNRQ86YZ3 2850 aaPredicted RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 IGHV3-43A0A0B4J1X8 118 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 MPTX1A8MV57 137 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 H0Y980 276 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 TSPAN4O14817 238 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 ADAP1O75689 374 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 RP2O75695 350 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 CDS2O95674 445 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 SERPINE2P07093 398 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 FGF2P09038 288 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 DANCRP0C864 163 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 PET100P0DJ07 73 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 CGB3P0DN86 165 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 CGB7P0DN87 165 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 IGHV3-43DP0DP04 118 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 PF4V1P10720 104 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 SLC25A4P12235 298 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 DAOP14920 347 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 RPA2P15927 270 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 UCP1P25874 307 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 SSTR5P35346 364 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 PPP1CCP36873 323 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 RPL31P62899 125 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 DEFA6Q01524 100 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 SMCO1Q147U7 214 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 LTC4SQ16873 150 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 IAH1Q2TAA2 248 aaPredicted RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 ANKRD55Q3KP44 614 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 SP6Q3SY56 376 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 MORN2Q502X0 79 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 DCAF12L2Q5VW00 463 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM268Q5VZI3 342 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 GGNBP1Q5YKI7 109 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 C11orf87Q6NUJ2 197 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF66Q6ZN08 573 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF546Q86UE3 836 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 DRAM1Q8N682 238 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 FAM216BQ8N7L0 139 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 INO80EQ8NBZ0 244 aaPredicted RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 UBALD1Q8TB05 177 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 PPP1R1CQ8WVI7 109 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 H1FXQ92522 213 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 MSI2Q96DH6 328 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM56Q96MV1 263 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 DCTN5Q9BTE1 182 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 REG4Q9BYZ8 158 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 SLC25A32Q9H2D1 315 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 LINC00574Q9H8X3 128 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 FAM212BQ9NTI7 297 aaPredicted RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 LIN7CQ9NUP9 197 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 DCAF16Q9NXF7 216 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 GSKIPQ9P0R6 139 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 MIOXQ9UGB7 285 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 LAMP3Q9UQV4 416 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 PRELID3BQ9Y3B1 194 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM56-RWDD3S4R434 201 aa4.34□□□□□ -1.71
HMGXB4-208ENST00000498325 TANC2Q9HCD6 1990 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 FXYD6-FXYD2A0A087WZ82 144 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 A0A0D9SG52 128 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 hCG_1809904A0A1W2PP81 198 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 A0A1W2PPE2 198 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 A0A1W2PR64 198 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 A0A1W2PRV1 198 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 B5MCH6 92 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 LYNX1G3V0Z9 82 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 TEX46H3BTG2 121 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 DVL1O14640 695 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 PPIHO43447 177 aaKnown RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 TNFSF12O43508 249 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 SCO1O75880 301 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 OR2F2O95006 317 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 IGHV2-70P01814 119 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 SOD3P08294 240 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 NMBP08949 121 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 LYNX1P0DP58 116 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 SELLP14151 372 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 VDAC1P21796 283 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 NFYBP25208 207 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 S100A11P31949 105 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 GPR6P46095 362 aaPredicted RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 GPR12P47775 334 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 EFNA4P52798 201 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 UBA52P62987 128 aaKnown RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 OR2F1Q13607 317 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 GNMTQ14749 295 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms