RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ZNF561Q8N587 486 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 OR5AP2Q8NGF4 316 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 MRAPQ8TCY5 172 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 MRPL48Q96GC5 212 aaKnown RBP4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 MED30Q96HR3 178 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 FAM218AQ96MZ4 157 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 TMEM59Q9BXS4 323 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 WDR13Q9H1Z4 485 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 RETNQ9HD89 108 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 PLCXD1Q9NUJ7 323 aa4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 TSSC4Q9Y5U2 329 aaPredicted RBP4.63□□□□□ -1.67
TMEM39A-212ENST00000497993 TET2Q6N021 2002 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 IGKV1-27A0A075B6S5 117 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 TRAV40A0A0B4J280 105 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 IGKV1-9A0A0C4DH69 117 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 IRGMA1A4Y4 181 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 OR2AT4A6NND4 320 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 GYPAP02724 150 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 CSN2P05814 226 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 CD37P11049 281 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 PSG2P11465 335 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 PRTN3P24158 256 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 OR12D2P58182 307 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 FGF12P61328 243 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 ELF3P78545 371 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 SSBP2P81877 361 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 PITPNAQ00169 270 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 DHODHQ02127 395 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 ZNF146Q15072 292 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 LRRC10Q5BKY1 277 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 PXDC1Q5TGL8 231 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 LINC00336Q6ZUF6 198 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 LYPD6Q86Y78 171 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 SAXO1Q8IYX7 474 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 C11orf42Q8N5U0 333 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 Q8N7P7 452 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 YIPF7Q8N8F6 280 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 OR52N1Q8NH53 320 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 RFESDQ8TAC1 157 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 TMEM80Q96HE8 168 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 MCUBQ9NWR8 336 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 HHLA2Q9UM44 414 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 MRPS28Q9Y2Q9 187 aaKnown RBP4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 TNCP24821 2201 aa4.62□□□□□ -1.67
TMEM39A-212ENST00000497993 IGHV1-69DA0A0B4J2H0 117 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 IGHV3-64DA0A0J9YX35 117 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 CENPVL3A0A0U1RRI6 287 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 A0A1B0GW55 424 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DNAJC9-AS1A6NH13 148 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 SMLR1H3BR10 107 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 K7N7A8 449 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 GPX5O75715 221 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 IGHV1-69P01742 117 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 PRSS1P07477 247 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 HTR1AP08908 422 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 SNRPCP09234 159 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 GNAO1P09471 354 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DUX4L2P0CJ85 424 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DUX4L3P0CJ86 424 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DUX4L4P0CJ87 422 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DUX4L5P0CJ88 424 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DUX4L6P0CJ89 424 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DUX4L7P0CJ90 424 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 ERP29P30040 261 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DLX6P56179 175 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 CDK5R1Q15078 307 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 ATP6V1FQ16864 119 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 NHLRC3Q5JS37 347 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 SPIN3Q5JUX0 258 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 LINC00242Q5T6M2 205 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 ELP2Q6IA86 826 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 HCP5Q6MZN7 132 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 HAGHLQ6PII5 290 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DUX4L9Q6RFH8 374 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 FAM216BQ8N7L0 139 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 PXT1Q8NFP0 134 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 OR10AC1Q8NH08 325 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 RGP1Q92546 391 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 SEH1LQ96EE3 360 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 ADAT3Q96EY9 351 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 PGLYRP3Q96LB9 341 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 TTTY10Q9BZA0 68 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 METTL8Q9H825 291 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 PLEKHA1Q9HB21 404 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 BEX1Q9HBH7 125 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 THYN1Q9P016 225 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 ZNRD1Q9P1U0 126 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 DUX4Q9UBX2 424 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 GNG8Q9UK08 70 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 PRELID1Q9Y255 219 aa4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 RCL1Q9Y2P8 373 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-212ENST00000497993 SAA2-SAA4A0A096LPE2 208 aa4.6□□□□□ -1.67
TMEM39A-212ENST00000497993 DAPL1A0PJW8 107 aa4.6□□□□□ -1.67
TMEM39A-212ENST00000497993 FAM231BA6NCW3 169 aa4.6□□□□□ -1.67
TMEM39A-212ENST00000497993 C17orf98A8MV24 154 aa4.6□□□□□ -1.67
TMEM39A-212ENST00000497993 VGLL3A8MV65 326 aa4.6□□□□□ -1.67
TMEM39A-212ENST00000497993 NDUFB3O43676 98 aa4.6□□□□□ -1.67
TMEM39A-212ENST00000497993 SYNGR1O43759 233 aa4.6□□□□□ -1.67
TMEM39A-212ENST00000497993 MPDU1O75352 247 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms