RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PSG4Q00888 419 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 EMX1Q04741 257 aaPredicted RBP2.2□□□□□ -2.06
VPS36-206ENST00000497149 PRDX1Q06830 199 aaKnown RBP2.2□□□□□ -2.06
VPS36-206ENST00000497149 SURF2Q15527 256 aaPredicted RBP2.2□□□□□ -2.06
VPS36-206ENST00000497149 IAH1Q2TAA2 248 aaPredicted RBP2.2□□□□□ -2.06
VPS36-206ENST00000497149 PYDC2Q56P42 97 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 C9orf64Q5T6V5 341 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 TMEM78Q5T7P6 136 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 HCP5Q6MZN7 132 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 SFXN4Q6P4A7 337 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 FAM183BPQ6ZVS7 135 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 DOLPP1Q86YN1 238 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 ZBTB8OSQ8IWT0 167 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 FAM24BQ8N5W8 94 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 OR8J3Q8NGG0 315 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 OR8S1Q8NH09 359 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 OR5J2Q8NH18 312 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 OR10D3Q8NH80 312 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 JOSD2Q8TAC2 188 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 TAMM41Q96BW9 452 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 PYURFQ96I23 114 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 CAPZA3Q96KX2 299 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 PPP1R2P1Q96PQ5 205 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 TBX5Q99593 518 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 GINS3Q9BRX5 216 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 MND1Q9BWT6 205 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 OR51E2Q9H255 320 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 LRTM1Q9HBL6 345 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 HES4Q9HCC6 221 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 ZNF586Q9NXT0 402 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 GLS2Q9UI32 602 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 JPT1Q9UK76 154 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 TRAPPC1Q9Y5R8 145 aa2.2□□□□□ -2.06
VPS36-206ENST00000497149 ZNF706Q9Y5V0 76 aaPredicted RBP2.2□□□□□ -2.06
VPS36-206ENST00000497149 VIRMAQ69YN4 1812 aaKnown RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 MYH3P11055 1940 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 YTHDC2Q9H6S0 1430 aaKnown RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 RIMS2Q9UQ26 1411 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 DOCK3Q8IZD9 2030 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 EXOC1LA0A1B0GW35 172 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 FAM159BA6NKW6 160 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 EEF1E1-BLOC1S5C9J1V9 151 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 ISLRO14498 428 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 SLC22A1O15245 554 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 CYB5BO43169 146 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 EEF1E1O43324 174 aaKnown RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 NDUFC2O95298 119 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 FBP1P09467 338 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 OR4A8P0C604 315 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 GPX2P18283 190 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 GNG2P59768 71 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 RPS28P62857 69 aaKnown RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 MRPS10P82664 201 aaKnown RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 EBPQ15125 230 aaKnown RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 RNASE10Q5GAN6 216 aaKnown RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 UBE2NLQ5JXB2 153 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 NAA40Q86UY6 237 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 LRP11Q86VZ4 500 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 OOSP2Q86WS3 158 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 KRTAP13-1Q8IUC0 172 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 AMN1Q8IY45 258 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 C20orf196Q8IYI0 205 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 LRRC18Q8N456 261 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 OR11H6Q8NGC7 330 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 OR4D11Q8NGI4 311 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 OR5A1Q8NGJ0 315 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 OR13C4Q8NGS5 318 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 ZNRF2Q8NHG8 242 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 CMTM2Q8TAZ6 248 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 ZNF675Q8TD23 568 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 GNPDA2Q8TDQ7 276 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 SLC37A2Q8TED4 501 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 BLNKQ8WV28 456 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 MBD3L1Q8WWY6 194 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 YPEL4Q96NS1 127 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 PKMYT1Q99640 499 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 EFCAB11Q9BUY7 163 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 PBDC1Q9BVG4 233 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 TMEM126AQ9H061 195 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 SH3BGRL3Q9H299 93 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 POMKQ9H5K3 350 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 UBQLN4Q9NRR5 601 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 LYRM2Q9NU23 88 aaPredicted RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 SSR3Q9UNL2 185 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 ICOSQ9Y6W8 199 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 RFX7Q2KHR2 1363 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 NUP153P49790 1475 aaKnown RBP2.19□□□□□ -2.06
VPS36-206ENST00000497149 PRR14LQ5THK1 2151 aa2.19□□□□□ -2.06
VPS36-206ENST00000497149 CCDC144AA2RUR9 1427 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 SPATA31E1Q6ZUB1 1445 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 SDK2Q58EX2 2172 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 A0A1W2PRE2 83 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 C5orf49A4QMS7 147 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 RBFOX3A6NFN3 312 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 G3V2T6 193 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 H7C1C5 153 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 K7ERU9 68 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 DEGS1O15121 323 aa2.18□□□□□ -2.06
VPS36-206ENST00000497149 GYG2O15488 501 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms