RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 CPNE4Q96A23 557 aaPredicted RBP2.77□□□□□ -1.97
TRIM4-205ENST00000496896 TVP23CQ96ET8 276 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 ARHGAP5-AS1Q96IT6 56 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 AKR1E2Q96JD6 320 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 OR10C1Q96KK4 312 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 TMEM56Q96MV1 263 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 CLCC1Q96S66 551 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 P2RX4Q99571 388 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 NIPSNAP3BQ9BS92 247 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 NICN1Q9BSH3 213 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 PECRQ9BY49 303 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 PARD6GQ9BYG4 376 aaPredicted RBP2.77□□□□□ -1.97
TRIM4-205ENST00000496896 EIF5A2Q9GZV4 153 aaKnown RBP2.77□□□□□ -1.97
TRIM4-205ENST00000496896 METTL9Q9H1A3 318 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 PTGES2Q9H7Z7 377 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 PLEKHF2Q9H8W4 249 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 ZNF286AQ9HBT8 521 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 OR2S2Q9NQN1 319 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 NIT2Q9NQR4 276 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 GPR84Q9NQS5 396 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 PNO1Q9NRX1 252 aaKnown RBP2.77□□□□□ -1.97
TRIM4-205ENST00000496896 CENPMQ9NSP4 180 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 PLEKHJ1Q9NW61 149 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 ANXA10Q9UJ72 324 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 DKKL1Q9UK85 242 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 LHFPL6Q9Y693 200 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 TMEM56-RWDD3S4R434 201 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 FREM3P0C091 2139 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 DOCK9Q9BZ29 2069 aa2.77□□□□□ -1.97
TRIM4-205ENST00000496896 EXPH5Q8NEV8 1989 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 TRBV24-1A0A075B6N3 115 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 KIR2DS1A0A191URI9 304 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 RBFOX3A6NFN3 312 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 NPIPA2E9PIF3 369 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 RPL36A-HNRNPH2H7BZ11 118 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 TP53I11O14683 189 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PPP1R2P9O14990 202 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 SOCS1O15524 211 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 TRAF3IP2O43734 574 aaPredicted RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PRH1P02810 166 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 HPNP05981 417 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 IGHV4-34P06331 123 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 OR8U9P0C7N5 309 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 OR5H8P0DN80 308 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 HIST1H1BP16401 226 aaKnown RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 ZNF17P17021 662 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 GABRG2P18507 467 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 BCKDHBP21953 392 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 CEACAM6P40199 344 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 CD200P41217 278 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 KIR2DS4P43632 304 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 OR3A4PP47883 348 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 HTR5AP47898 357 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 RBP2P50120 134 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PPT1P50897 306 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 RND2P52198 227 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 BIDP55957 195 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PIGPP57054 158 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 TAS2R30P59541 319 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PCBD1P61457 104 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 RPS23P62266 143 aaKnown RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 SERF2P84101 59 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 DEFA6Q01524 100 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 ZNF616Q08AN1 781 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 IL24Q13007 206 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 KLF5Q13887 457 aaPredicted RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 KIR2DS1Q14954 304 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 SLC9A3R2Q15599 337 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 SSX2Q16385 188 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 MPV17LQ2QL34 196 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 DEFB110Q30KQ9 67 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PLPPR5Q32ZL2 321 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 RIPPLY2Q5TAB7 128 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 FAM27BQ5VT28 67 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 FBXW12Q6X9E4 464 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 GALNTL5Q7Z4T8 443 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 STX12Q86Y82 276 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 TGIF2LYQ8IUE0 185 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 H1FOOQ8IZA3 346 aaPredicted RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 C14orf178Q8N769 122 aaPredicted RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 ZNF283Q8N7M2 679 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 FADS6Q8N9I5 356 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 OR4D5Q8NGN0 318 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 OR8U1Q8NH10 309 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 OR51F2Q8NH61 342 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 NANPQ8TBE9 248 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 RNASEH2CQ8TDP1 164 aaKnown RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 DOK4Q8TEW6 326 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 RTN4IP1Q8WWV3 396 aaPredicted RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PATE1Q8WXA2 126 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 MAFIPQ8WZ33 124 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 TMEM54Q969K7 222 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PINX1Q96BK5 328 aaKnown RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 CMBLQ96DG6 245 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 MUCL1Q96DR8 90 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 MRPL38Q96DV4 380 aaKnown RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 YPEL4Q96NS1 127 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PFDN5Q99471 154 aa2.76□□□□□ -1.97
TRIM4-205ENST00000496896 ZNF2Q9BSG1 426 aaPredicted RBP2.76□□□□□ -1.97
TRIM4-205ENST00000496896 PSMG3Q9BT73 122 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms