RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 ST6GALNAC6Q969X2 333 aa6.55□□□□□ -1.36
SMARCD3-215ENST00000496530 C5orf30Q96GV9 206 aa6.55□□□□□ -1.36
SMARCD3-215ENST00000496530 TP53RKQ96S44 253 aa6.55□□□□□ -1.36
SMARCD3-215ENST00000496530 ZNF251Q9BRH9 671 aa6.55□□□□□ -1.36
SMARCD3-215ENST00000496530 MARVELD1Q9BSK0 173 aa6.55□□□□□ -1.36
SMARCD3-215ENST00000496530 C16orf95Q9H693 158 aa6.55□□□□□ -1.36
SMARCD3-215ENST00000496530 NAA60Q9H7X0 242 aa6.55□□□□□ -1.36
SMARCD3-215ENST00000496530 ANK3Q12955 4377 aaKnown RBP6.55□□□□□ -1.36
SMARCD3-215ENST00000496530 C5orf51A6NDU8 294 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 A6NDX4 124 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 RBMXL2O75526 392 aaKnown RBP6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 ATG12O94817 140 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 MOSP00540 346 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 HRASP01112 189 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 IFNA21P01568 189 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 IGKV1D-33P01593 117 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 IGKV1-33P01594 117 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 SNRNP70P08621 437 aaKnown RBP6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 TMEM11P17152 192 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 CD1BP29016 333 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 UBE2MP61081 183 aaKnown RBP6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 ERVK-16P61578 105 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 RND3P61587 244 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 TAGLNQ01995 201 aaKnown RBP6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 OXA1LQ15070 435 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 TMEM268Q5VZI3 342 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 Q6ZSV7 163 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 LYG2Q86SG7 212 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 THNSL2Q86YJ6 484 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 LGI3Q8N145 548 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 LINC01006Q8NI28 216 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 ZNF431Q8TF32 576 aaPredicted RBP6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 CHPT1Q8WUD6 406 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 TMEM230Q96A57 120 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 RRNAD1Q96FB5 475 aaKnown RBP6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 RITA1Q96K30 269 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 PHB2Q99623 299 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 SLC25A33Q9BSK2 321 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 ALX4Q9H161 411 aaPredicted RBP6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 MED28Q9H204 178 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 OR51J1Q9H342 316 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 GSKIPQ9P0R6 139 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 WASHC3Q9Y3C0 194 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 NF1P21359 2839 aa6.54□□□□□ -1.36
SMARCD3-215ENST00000496530 H0YJW9 148 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 CREBL2O60519 120 aaPredicted RBP6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 PRAF2O60831 178 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 RAMP3O60896 148 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 SNAPC5O75971 98 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 OR2F2O95006 317 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 HPRT1P00492 218 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 IL5P05113 134 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 G6PCP35575 357 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 RELBQ01201 579 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 TMEM187Q14656 261 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 MSMO1Q15800 293 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 TATDN3Q17R31 274 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 C9orf152Q5JTZ5 239 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 H2BFWTQ7Z2G1 175 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 LYZL2Q7Z4W2 148 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 TMEM219Q86XT9 240 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 SELENOHQ8IZQ5 122 aaKnown RBP6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 VKORC1L1Q8N0U8 176 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 TCTEX1D1Q8N7M0 179 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 OR4S2Q8NH73 311 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 GLYATL2Q8WU03 294 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 R3HDM4Q96D70 268 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 SEC22AQ96IW7 307 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 EAF1Q96JC9 268 aaPredicted RBP6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 RASL11BQ9BPW5 248 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 AIFM2Q9BRQ8 373 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 TMEM222Q9H0R3 208 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 LIN7CQ9NUP9 197 aaKnown RBP6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 KIAA1456Q9P272 454 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 MOB4Q9Y3A3 225 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 ALG5Q9Y673 324 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 JMJD1CQ15652 2540 aa6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
SMARCD3-215ENST00000496530 A0A1W2PPI3 338 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 H0Y980 276 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 M0QZ24 198 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 S1PR2O95136 353 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 CNIH1O95406 144 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 SIX6O95475 246 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 DUS4LO95620 317 aaKnown RBP6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 IGKV1-16P04430 117 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 NQO2P16083 231 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 CNTFRP26992 372 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 VDAC2P45880 294 aaPredicted RBP6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 LGALS7P47929 136 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 ZNF137PP52743 207 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 AKR1C2P52895 323 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 F2RL1P55085 397 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 GNB1P62873 340 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 SUPT4H1P63272 117 aaKnown RBP6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 DHRS2Q13268 280 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 ANKRD55Q3KP44 614 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 VMA21Q3ZAQ7 101 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 ZNF585BQ52M93 769 aa6.52□□□□□ -1.37
SMARCD3-215ENST00000496530 FAM71F2Q6NXP2 309 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms