RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RTN4RL2Q86UN3 420 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 SNX29P2Q8IUI4 249 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 DYNAPQ8N1N2 210 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 Q8N2B8 174 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 C11orf42Q8N5U0 333 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 ASCC1Q8N9N2 400 aaKnown RBP5.06□□□□□ -1.6
VIM-207ENST00000495528 SUMF2Q8NBJ7 301 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 OR5D13Q8NGL4 314 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 RAB3CQ96E17 227 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 ARHGAP5-AS1Q96IT6 56 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 MS4A10Q96PG2 267 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 SULT4A1Q9BR01 284 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 TM2D1Q9BX74 207 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 CHST6Q9GZX3 395 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 C19orf12Q9NSK7 152 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 MDFICQ9P1T7 246 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 TRAV39A0A0B4J263 110 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 WI2-2373I1.2A0A1W2PRP0 233 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 MEIS3P1A6NDR6 274 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 SLC33A1O00400 549 aaPredicted RBP5.05□□□□□ -1.6
VIM-207ENST00000495528 PDCD6O75340 191 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 FCER2P06734 321 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 COX7A1P24310 79 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 PRSS3P35030 304 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 MNDAP41218 407 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 TAS2R20P59543 309 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 BLCAPP62952 87 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 PITPNAQ00169 270 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 RBM39Q14498 530 aaKnown RBP5.05□□□□□ -1.6
VIM-207ENST00000495528 MPV17LQ2QL34 196 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 PYDC2Q56P42 97 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 PAN3Q58A45 887 aaKnown RBP5.05□□□□□ -1.6
VIM-207ENST00000495528 NHLRC3Q5JS37 347 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 SPIN3Q5JUX0 258 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 SPANXN2Q5MJ10 180 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 ZNF554Q86TJ5 538 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 LINC00596Q86U02 117 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 ZNF561Q8N587 486 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 TMEM185AQ8NFB2 350 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 CCDC107Q8WV48 283 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 SDSLQ96GA7 329 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 SGK494Q96LW2 274 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 TSC22D3Q99576 134 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 SOSTQ9BQB4 213 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 AUNIPQ9H7T9 357 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 HEXA-AS1Q9H8Q6 139 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 ZNF222Q9UK12 451 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 GAB2Q9UQC2 676 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 KCNK7Q9Y2U2 307 aa5.05□□□□□ -1.6
VIM-207ENST00000495528 A0A0A6YYH2 397 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 MEX3AA1L020 520 aaKnown RBP5.04□□□□□ -1.6
VIM-207ENST00000495528 A6NDX4 124 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 TMEM235A6NFC5 223 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 A6NJ64 397 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 FOXI3A8MTJ6 420 aaPredicted RBP5.04□□□□□ -1.6
VIM-207ENST00000495528 VGLL3A8MV65 326 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 K7N7A8 449 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 SCGNO76038 276 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 MT-ND4P03905 459 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 GLAP06280 429 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 CD3GP09693 182 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 HIST1H1DP16402 221 aaKnown RBP5.04□□□□□ -1.6
VIM-207ENST00000495528 CCL3L1P16619 93 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 MT3P25713 68 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 OR3A1P47881 315 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 GLIPR1P48060 266 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 RPL31P62899 125 aaKnown RBP5.04□□□□□ -1.6
VIM-207ENST00000495528 CX3CL1P78423 397 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 MRPS15P82914 257 aaKnown RBP5.04□□□□□ -1.6
VIM-207ENST00000495528 ZNF45Q02386 682 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 AESQ08117 197 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 EDDM3AQ14507 147 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 GRK1Q15835 563 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 LDLRAD2Q5SZI1 272 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 HACD4Q5VWC8 232 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 GDPD3Q7L5L3 318 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 C5orf24Q7Z6I8 188 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 OR8H2Q8N162 312 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 TPRX1Q8N7U7 411 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 ZNF383Q8NA42 475 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 OR4K15Q8NH41 348 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 PLPPR1Q8TBJ4 325 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 SETD6Q8TBK2 473 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 S100ZQ8WXG8 99 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 CMSS1Q9BQ75 279 aaKnown RBP5.04□□□□□ -1.6
VIM-207ENST00000495528 HDHD3Q9BSH5 251 aaPredicted RBP5.04□□□□□ -1.6
VIM-207ENST00000495528 ST6GALNAC5Q9BVH7 336 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 SPACA1Q9HBV2 294 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 AK3Q9UIJ7 227 aa5.04□□□□□ -1.6
VIM-207ENST00000495528 J3QRK9 145 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 MFNGO00587 321 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 SSX5O60225 188 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 ZNF737O75373 536 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 RBBP9O75884 186 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 ARG1P05089 322 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 ETV6P41212 452 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 PPP5CP53041 499 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 EDDM3BP56851 147 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 GNG2P59768 71 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 ZNF273Q14593 569 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms