RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CDK10Q15131 360 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 RBPMS2Q6ZRY4 209 aaKnown RBP10.67□□□□□ -0.7
VARS-228ENST00000495010 LYG2Q86SG7 212 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 C8orf59Q8N0T1 100 aaPredicted RBP10.67□□□□□ -0.7
VARS-228ENST00000495010 BPIFB6Q8NFQ5 453 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 CABLES2Q9BTV7 478 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 MND1Q9BWT6 205 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 ZNF257Q9Y2Q1 563 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 TRBV6-7A0A0A0MS04 114 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 ERICH4A6NGS2 130 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 SLC17A2O00624 439 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 SPRY2O43597 315 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 IGHV3-23P01764 117 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 UCHL1P09936 223 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 SAA1P0DJI8 122 aaPredicted RBP10.66□□□□□ -0.7
VARS-228ENST00000495010 DUTP33316 252 aaKnown RBP10.66□□□□□ -0.7
VARS-228ENST00000495010 BMI1P35226 326 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 PLAC9Q5JTB6 97 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 OR4A47Q6IF82 309 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 CLEC19AQ6UXS0 136 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 RPP25LQ8N5L8 163 aaKnown RBP10.66□□□□□ -0.7
VARS-228ENST00000495010 UXS1Q8NBZ7 420 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 C5orf30Q96GV9 206 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 CENPOQ9BU64 300 aa10.66□□□□□ -0.7
VARS-228ENST00000495010 HMX3A6NHT5 357 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 DENRO43583 198 aaKnown RBP10.65□□□□□ -0.7
VARS-228ENST00000495010 FCGR3BO75015 233 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 DIRAS3O95661 229 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 DHFRP00374 187 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 FCGR3AP08637 254 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 CD37P11049 281 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 C10orf55Q5SWW7 151 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 SLC38A6Q8IZM9 456 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 TMEM217Q8N7C4 229 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 OR1L6Q8NGR2 347 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 EEF1AKMT3Q96AZ1 226 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 RAB3CQ96E17 227 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 FYTTD1Q96QD9 318 aaKnown RBP10.65□□□□□ -0.7
VARS-228ENST00000495010 PLCXD1Q9NUJ7 323 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 MLXQ9UH92 298 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 TP53TG1Q9Y2A0 90 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 AK6Q9Y3D8 172 aaKnown RBP10.65□□□□□ -0.7
VARS-228ENST00000495010 DMRT1Q9Y5R6 373 aa10.65□□□□□ -0.7
VARS-228ENST00000495010 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 LINC00473A8K010 186 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 CDK1P06493 297 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 CLDN12P56749 244 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 MED22Q15528 200 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 C2orf76Q3KRA6 126 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 BTNL8Q6UX41 500 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 Q6ZWC4 215 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 MAFIPQ8WZ33 124 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 UFD1Q92890 307 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 TMEM203Q969S6 136 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 FAM3DQ96BQ1 224 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 OR51E2Q9H255 320 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 C8orf4Q9NR00 106 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 MRPS7Q9Y2R9 242 aaKnown RBP10.64□□□□□ -0.71
VARS-228ENST00000495010 PRELID3BQ9Y3B1 194 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 S4R3C0 116 aa10.64□□□□□ -0.71
VARS-228ENST00000495010 A0A075B6Q4 140 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 TMEM213A2RRL7 107 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 NPIPB5A8MRT5 1133 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 A8MWP6 167 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 J3QRK9 145 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 UBE2CO00762 179 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 ARL6IP5O75915 188 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 GADD45AP24522 165 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 TALDO1P37837 337 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 RPL27AP46776 148 aaKnown RBP10.63□□□□□ -0.71
VARS-228ENST00000495010 EWSR1Q01844 656 aaKnown RBP eCLIP10.63□□□□□ -0.71
VARS-228ENST00000495010 SPHARQ15513 63 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 KCTD9Q7L273 389 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 OR2C3Q8N628 320 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 PACRGLQ8N7B6 248 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 VSTM2AQ8TAG5 236 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 MARC2Q969Z3 335 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 RAB22AQ9UL26 194 aa10.63□□□□□ -0.71
VARS-228ENST00000495010 DEDDO75618 318 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 DEFA4P12838 97 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 HIST1H1BP16401 226 aaKnown RBP10.62□□□□□ -0.71
VARS-228ENST00000495010 ATF4P18848 351 aaPredicted RBP10.62□□□□□ -0.71
VARS-228ENST00000495010 ARFRP1Q13795 201 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 ZNF585BQ52M93 769 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 OR2B11Q5JQS5 317 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 LIPKQ5VXJ0 399 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 H1FOOQ8IZA3 346 aaPredicted RBP10.62□□□□□ -0.71
VARS-228ENST00000495010 STPG3Q8N7X2 389 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 CCDC140Q96MF4 163 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 OR2A7Q96R45 310 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 GFI1Q99684 422 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 SLC2A9Q9NRM0 540 aa10.62□□□□□ -0.71
VARS-228ENST00000495010 TRBV7-1A0A0A6YYK4 115 aa10.61□□□□□ -0.71
VARS-228ENST00000495010 TMEM272A0A1B0GTI8 110 aa10.61□□□□□ -0.71
VARS-228ENST00000495010 TEX22C9J3V5 150 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms