RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SAA1P0DJI8 122 aaPredicted RBP16.74■□□□□ 0.27
HDDC3-203ENST00000494993 ZNF45Q02386 682 aa16.74■□□□□ 0.27
HDDC3-203ENST00000494993 TBCEQ15813 527 aaPredicted RBP16.74■□□□□ 0.27
HDDC3-203ENST00000494993 ZNF430Q9H8G1 570 aaPredicted RBP16.74■□□□□ 0.27
HDDC3-203ENST00000494993 METTL21EPA6NDL7 271 aa16.73■□□□□ 0.27
HDDC3-203ENST00000494993 CREBL2O60519 120 aaPredicted RBP16.73■□□□□ 0.27
HDDC3-203ENST00000494993 MYL9P24844 172 aa16.73■□□□□ 0.27
HDDC3-203ENST00000494993 ATP5G2Q06055 141 aa16.73■□□□□ 0.27
HDDC3-203ENST00000494993 CDK10Q15131 360 aa16.73■□□□□ 0.27
HDDC3-203ENST00000494993 ADAMTSL5Q6ZMM2 481 aa16.73■□□□□ 0.27
HDDC3-203ENST00000494993 HYDINQ4G0P3 5121 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 BIRC6Q9NR09 4857 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 TUSC2O75896 110 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 ACTL6BO94805 426 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 RAB3BP20337 219 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 DTYMKP23919 212 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 ZNF367Q7RTV3 350 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 MMD2Q8IY49 270 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 TTC9CQ8N5M4 171 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 ZNF645Q8N7E2 425 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 SPIN2AQ99865 258 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 SPIN2BQ9BPZ2 258 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 PLEKHA3Q9HB20 300 aa16.72■□□□□ 0.27
HDDC3-203ENST00000494993 ELF5Q9UKW6 265 aaPredicted RBP16.72■□□□□ 0.27
HDDC3-203ENST00000494993 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.71■□□□□ 0.27
HDDC3-203ENST00000494993 CD81P60033 236 aa16.71■□□□□ 0.27
HDDC3-203ENST00000494993 ARL6IP1Q15041 203 aa16.71■□□□□ 0.27
HDDC3-203ENST00000494993 CD300EQ496F6 205 aaPredicted RBP16.71■□□□□ 0.27
HDDC3-203ENST00000494993 C10orf55Q5SWW7 151 aa16.71■□□□□ 0.27
HDDC3-203ENST00000494993 LINC00322Q6ZN03 302 aaPredicted RBP16.71■□□□□ 0.27
HDDC3-203ENST00000494993 LAX1Q8IWV1 398 aa16.71■□□□□ 0.27
HDDC3-203ENST00000494993 DCUN1D5Q9BTE7 237 aa16.71■□□□□ 0.27
HDDC3-203ENST00000494993 RETNQ9HD89 108 aa16.71■□□□□ 0.27
HDDC3-203ENST00000494993 NDUFB11Q9NX14 153 aa16.71■□□□□ 0.27
HDDC3-203ENST00000494993 CEPT1Q9Y6K0 416 aa16.71■□□□□ 0.27
HDDC3-203ENST00000494993 J3QRK9 145 aa16.7■□□□□ 0.26
HDDC3-203ENST00000494993 FCGR3BO75015 233 aa16.7■□□□□ 0.26
HDDC3-203ENST00000494993 KCTD9Q7L273 389 aa16.7■□□□□ 0.26
HDDC3-203ENST00000494993 NECAP1Q8NC96 275 aa16.7■□□□□ 0.26
HDDC3-203ENST00000494993 NEURL2Q9BR09 285 aa16.7■□□□□ 0.26
HDDC3-203ENST00000494993 ATG5Q9H1Y0 275 aa16.7■□□□□ 0.26
HDDC3-203ENST00000494993 PRELID3BQ9Y3B1 194 aa16.7■□□□□ 0.26
HDDC3-203ENST00000494993 TRDV1A0A1B0GX56 115 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 TPPPO94811 219 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 FAM209BQ5JX69 171 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 SLC25A42Q86VD7 318 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 NR2C2APQ86WQ0 139 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 DYNLRB2Q8TF09 96 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 KCTD12Q96CX2 325 aaKnown RBP16.69■□□□□ 0.26
HDDC3-203ENST00000494993 HIPK2Q9H2X6 1198 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 SLC2A8Q9NY64 477 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 MRPS7Q9Y2R9 242 aaKnown RBP16.69■□□□□ 0.26
HDDC3-203ENST00000494993 RBMX2Q9Y388 322 aaKnown RBP16.69■□□□□ 0.26
HDDC3-203ENST00000494993 OR2W1Q9Y3N9 320 aa16.69■□□□□ 0.26
HDDC3-203ENST00000494993 ZNF785A8K8V0 405 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 OR2J3O76001 311 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 HLA-DQB1P01920 261 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 CD36P16671 472 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 NFYAP23511 347 aaPredicted RBP16.68■□□□□ 0.26
HDDC3-203ENST00000494993 RPL30P62888 115 aaKnown RBP16.68■□□□□ 0.26
HDDC3-203ENST00000494993 C15orf32Q32M92 178 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 CDNFQ49AH0 187 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 OR2B11Q5JQS5 317 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 ST6GALNAC5Q9BVH7 336 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 DMRT1Q9Y5R6 373 aa16.68■□□□□ 0.26
HDDC3-203ENST00000494993 HMX3A6NHT5 357 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 PPP5D1E7EU14 171 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 SLC22A5O76082 557 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 CD7P09564 240 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 CTXN2P0C2S0 81 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 DEFB114Q30KQ6 69 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 C22orf42Q6IC83 251 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 FAM110AQ9BQ89 295 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 OR51E2Q9H255 320 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 ZNF257Q9Y2Q1 563 aa16.67■□□□□ 0.26
HDDC3-203ENST00000494993 IGKV1D-13A0A0B4J2D9 117 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 C2orf70A6NJV1 201 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 TEX22C9J3V5 150 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 IGLV2-14P01704 120 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 IGKV1-13P0DP09 117 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 GALP22466 123 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 HACD4Q5VWC8 232 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 VKORC1L1Q8N0U8 176 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 DEFB125Q8N687 156 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 DCSTAMPQ9H295 470 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 BLOC1S6Q9UL45 172 aa16.66■□□□□ 0.26
HDDC3-203ENST00000494993 PLECQ15149 4684 aaKnown RBP16.66■□□□□ 0.26
HDDC3-203ENST00000494993 SMIM30A4D0T7 59 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 GGCTO75223 188 aaKnown RBP16.65■□□□□ 0.26
HDDC3-203ENST00000494993 KBTBD11O94819 623 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 HLA-AP01891 365 aaKnown RBP16.65■□□□□ 0.26
HDDC3-203ENST00000494993 FOLR2P14207 255 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 EDN2P20800 178 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 KIR2DS2P43631 304 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 C19orf35Q6ZS72 473 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 OR4S2Q8NH73 311 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 IL17DQ8TAD2 202 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 VSTM2AQ8TAG5 236 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 NUDCD2Q8WVJ2 157 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 OR2A7Q96R45 310 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms