RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 FAM25CB3EWG5 89 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 FAM25GB3EWG6 89 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 PMP2P02689 132 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 ELK1P19419 428 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 HOXD3P31249 432 aaPredicted RBP17.03■□□□□ 0.32
HPS3-207ENST00000494327 RFX2P48378 723 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 SSBP2P81877 361 aaPredicted RBP17.03■□□□□ 0.32
HPS3-207ENST00000494327 TNXAQ16473 311 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 SNX29P2Q8IUI4 249 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 OR5M8Q8NGP6 311 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 OR1N2Q8NGR9 330 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 GIMAP1Q8WWP7 306 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 CMTM3Q96MX0 182 aa17.03■□□□□ 0.32
HPS3-207ENST00000494327 MCRIP2Q9BUT9 160 aaKnown RBP17.03■□□□□ 0.32
HPS3-207ENST00000494327 I3L521 148 aa17.02■□□□□ 0.32
HPS3-207ENST00000494327 EIF4EBP1Q13541 118 aaPredicted RBP17.02■□□□□ 0.32
HPS3-207ENST00000494327 PYHIN1Q6K0P9 492 aa17.02■□□□□ 0.32
HPS3-207ENST00000494327 ZNF66Q6ZN08 573 aa17.02■□□□□ 0.32
HPS3-207ENST00000494327 OVCH2Q7RTZ1 564 aa17.02■□□□□ 0.32
HPS3-207ENST00000494327 REC114Q7Z4M0 266 aa17.02■□□□□ 0.32
HPS3-207ENST00000494327 TMEM17Q86X19 198 aa17.02■□□□□ 0.32
HPS3-207ENST00000494327 AP3S1Q92572 193 aa17.02■□□□□ 0.32
HPS3-207ENST00000494327 PHB2Q99623 299 aa17.02■□□□□ 0.32
HPS3-207ENST00000494327 ALX4Q9H161 411 aaPredicted RBP17.02■□□□□ 0.32
HPS3-207ENST00000494327 AURKAIP1Q9NWT8 199 aaPredicted RBP17.02■□□□□ 0.32
HPS3-207ENST00000494327 SAA1P0DJI8 122 aaPredicted RBP17.01■□□□□ 0.31
HPS3-207ENST00000494327 APELAP0DMC3 54 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 ZNF182P17025 639 aaPredicted RBP17.01■□□□□ 0.31
HPS3-207ENST00000494327 TPPP2P59282 170 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 HERV-K104P61576 105 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 PRSS8Q16651 343 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 MRGPRG-AS1Q2M3A8 158 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 VKORC1L1Q8N0U8 176 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 OR5H2Q8NGV7 314 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 OR4S2Q8NH73 311 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 DPF1Q92782 380 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 GPR61Q9BZJ8 451 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 ANAPC10Q9UM13 185 aa17.01■□□□□ 0.31
HPS3-207ENST00000494327 IGHV3-11P01762 117 aa17■□□□□ 0.31
HPS3-207ENST00000494327 TRGV3P03979 118 aa17■□□□□ 0.31
HPS3-207ENST00000494327 HLA-DMAP28067 261 aa17■□□□□ 0.31
HPS3-207ENST00000494327 MRAPQ8TCY5 172 aa17■□□□□ 0.31
HPS3-207ENST00000494327 ZNF2Q9BSG1 426 aaPredicted RBP17■□□□□ 0.31
HPS3-207ENST00000494327 NOTCH3Q9UM47 2321 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 MSGN1A6NI15 193 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 ACTL6BO94805 426 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 NAT1P18440 290 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 BRWD1-AS2P59051 145 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 TAS2R46P59540 309 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 KRTAP10-11P60412 298 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 RUNX1Q01196 453 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 ZNF616Q08AN1 781 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 DYRK1AQ13627 763 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 ZBTB34Q8NCN2 500 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 DYNC2LI1Q8TCX1 351 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 GPX8Q8TED1 209 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 SLA2Q9H6Q3 261 aa16.99■□□□□ 0.31
HPS3-207ENST00000494327 ZNF430Q9H8G1 570 aaPredicted RBP16.99■□□□□ 0.31
HPS3-207ENST00000494327 SULT1C2O00338 296 aa16.98■□□□□ 0.31
HPS3-207ENST00000494327 FHL3Q13643 280 aa16.98■□□□□ 0.31
HPS3-207ENST00000494327 MSMO1Q15800 293 aa16.98■□□□□ 0.31
HPS3-207ENST00000494327 RNASE12Q5GAN4 147 aaKnown RBP16.98■□□□□ 0.31
HPS3-207ENST00000494327 ASPHD1Q5U4P2 390 aa16.98■□□□□ 0.31
HPS3-207ENST00000494327 DHRS11Q6UWP2 260 aa16.98■□□□□ 0.31
HPS3-207ENST00000494327 ZNF818PQ6ZRF7 136 aa16.98■□□□□ 0.31
HPS3-207ENST00000494327 LYSMD2Q8IV50 215 aa16.98■□□□□ 0.31
HPS3-207ENST00000494327 POC5Q8NA72 575 aa16.98■□□□□ 0.31
HPS3-207ENST00000494327 MPPED1O15442 326 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 LGALS1P09382 135 aaKnown RBP16.97■□□□□ 0.31
HPS3-207ENST00000494327 OR8U8P0C7N1 319 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 HRH1P35367 487 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 KIR2DS2P43631 304 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 SSX9Q7RTT3 188 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 MMD2Q8IY49 270 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 SPAG16Q8N0X2 631 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 SRSF12Q8WXF0 261 aaKnown RBP16.97■□□□□ 0.31
HPS3-207ENST00000494327 TMEM68Q96MH6 324 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 SCPEP1Q9HB40 452 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 COA4Q9NYJ1 87 aa16.97■□□□□ 0.31
HPS3-207ENST00000494327 CREBL2O60519 120 aaPredicted RBP16.96■□□□□ 0.31
HPS3-207ENST00000494327 RAMP3O60896 148 aa16.96■□□□□ 0.31
HPS3-207ENST00000494327 OR2A4O95047 310 aa16.96■□□□□ 0.31
HPS3-207ENST00000494327 CATR1Q13166 79 aa16.96■□□□□ 0.31
HPS3-207ENST00000494327 OR6F1Q8NGZ6 308 aa16.96■□□□□ 0.31
HPS3-207ENST00000494327 OR51H1Q8NH63 302 aa16.96■□□□□ 0.31
HPS3-207ENST00000494327 MOB3AQ96BX8 217 aa16.96■□□□□ 0.31
HPS3-207ENST00000494327 OR2A7Q96R45 310 aa16.96■□□□□ 0.31
HPS3-207ENST00000494327 EXTL2Q9UBQ6 330 aa16.96■□□□□ 0.31
HPS3-207ENST00000494327 SEC14L6B5MCN3 397 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 RGS5O15539 181 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 HRASP01112 189 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 GNRHRP30968 328 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 TSPAN5P62079 268 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 EGFEM1PQ0D2K5 195 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 C10orf55Q5SWW7 151 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 AADACL3Q5VUY0 350 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 VSTM2AQ8TAG5 236 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 RHOVQ96L33 236 aa16.95■□□□□ 0.3
HPS3-207ENST00000494327 CCDC59Q9P031 241 aaKnown RBP16.95■□□□□ 0.3
HPS3-207ENST00000494327 IGHV4OR15-8A0A075B7B6 117 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms