RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ALDH3A1P30838 453 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 CASQ1P31415 396 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 LAMB2P55268 1798 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 LYZL1Q6UWQ5 148 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 COA5Q86WW8 74 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 TMEM156Q8N614 296 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 PACRGLQ8N7B6 248 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 OR1L8Q8NGR8 309 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 EEF1AKMT1Q8WVE0 214 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 TTTY13Q9BZ97 58 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 UPF3BQ9BZI7 483 aaKnown RBP1.02□□□□□ -2.25
SMC4-223ENST00000493695 RBM7Q9Y580 266 aaKnown RBP1.02□□□□□ -2.25
SMC4-223ENST00000493695 NUP160Q12769 1436 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 TRGV2A0A075B6R0 118 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 CCL5P13501 91 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 CA5AP35218 305 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 FXYD7P58549 80 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 TAS2R20P59543 309 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 GNA12Q03113 381 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 GLO1Q04760 184 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 LRRC75BQ2VPJ9 315 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 SLC36A2Q495M3 483 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 SAPCD1Q5SSQ6 148 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 TMEM42Q69YG0 159 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 TNFAIP8L2Q6P589 184 aaPredicted RBP1.01□□□□□ -2.25
SMC4-223ENST00000493695 NAA40Q86UY6 237 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 DYNAPQ8N1N2 210 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 TMEM161BQ8NDZ6 487 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 GNPNAT1Q96EK6 184 aaPredicted RBP1.01□□□□□ -2.25
SMC4-223ENST00000493695 NMNAT3Q96T66 252 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 HRASLSQ9HDD0 168 aa1.01□□□□□ -2.25
SMC4-223ENST00000493695 CUL9Q8IWT3 2517 aa1□□□□□ -2.25
SMC4-223ENST00000493695 SMARCA4P51532 1647 aa1□□□□□ -2.25
SMC4-223ENST00000493695 ABCC11Q96J66 1382 aa1□□□□□ -2.25
SMC4-223ENST00000493695 A0A0J9YW62 118 aa1□□□□□ -2.25
SMC4-223ENST00000493695 PGLYRP1O75594 196 aaPredicted RBP1□□□□□ -2.25
SMC4-223ENST00000493695 IL3P08700 152 aa1□□□□□ -2.25
SMC4-223ENST00000493695 CD40LGP29965 261 aa1□□□□□ -2.25
SMC4-223ENST00000493695 CDC34P49427 236 aaPredicted RBP1□□□□□ -2.25
SMC4-223ENST00000493695 CDK9P50750 372 aaKnown RBP1□□□□□ -2.25
SMC4-223ENST00000493695 TNFAIP6P98066 277 aaPredicted RBP1□□□□□ -2.25
SMC4-223ENST00000493695 ACSM3Q53FZ2 586 aa1□□□□□ -2.25
SMC4-223ENST00000493695 C1orf194Q5T5A4 169 aa1□□□□□ -2.25
SMC4-223ENST00000493695 FAM9CQ8IZT9 166 aa1□□□□□ -2.25
SMC4-223ENST00000493695 UBL4BQ8N7F7 174 aa1□□□□□ -2.25
SMC4-223ENST00000493695 OR51T1Q8NGJ9 327 aa1□□□□□ -2.25
SMC4-223ENST00000493695 OR13C8Q8NGS7 320 aa1□□□□□ -2.25
SMC4-223ENST00000493695 SGMS2Q8NHU3 365 aa1□□□□□ -2.25
SMC4-223ENST00000493695 RAB2BQ8WUD1 216 aa1□□□□□ -2.25
SMC4-223ENST00000493695 HSPB9Q9BQS6 159 aa1□□□□□ -2.25
SMC4-223ENST00000493695 NAA38Q9BRA0 125 aaKnown RBP1□□□□□ -2.25
SMC4-223ENST00000493695 MRPL32Q9BYC8 188 aaKnown RBP1□□□□□ -2.25
SMC4-223ENST00000493695 ZNHIT6Q9NWK9 470 aaKnown RBP1□□□□□ -2.25
SMC4-223ENST00000493695 POLR1DQ9Y2S0 133 aa1□□□□□ -2.25
SMC4-223ENST00000493695 COQ4Q9Y3A0 265 aa1□□□□□ -2.25
SMC4-223ENST00000493695 NUMA1Q14980 2115 aa1□□□□□ -2.25
SMC4-223ENST00000493695 EIF4G1Q04637 1599 aaKnown RBP1□□□□□ -2.25
SMC4-223ENST00000493695 PTPRSQ13332 1948 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 CPAMD8Q8IZJ3 1885 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 MALRD1Q5VYJ5 2156 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 C1orf232A0A0U1RR37 186 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 IGKV2-29A2NJV5 120 aaPredicted RBP0.99□□□□□ -2.25
SMC4-223ENST00000493695 TXNDC9O14530 226 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 COX7A2LO14548 114 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 ZNF737O75373 536 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 CCL1P22362 96 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 EMP1P54849 157 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
SMC4-223ENST00000493695 SLC38A11Q08AI6 406 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 FAM78BQ5VT40 261 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 CST9Q5W186 159 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 LRRC28Q86X40 367 aaPredicted RBP0.99□□□□□ -2.25
SMC4-223ENST00000493695 UMODL1-AS1Q8N2C9 162 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 C10orf126Q8N4M7 172 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 OR8B12Q8NGG6 310 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 OR2T27Q8NH04 317 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 C12orf43Q96C57 262 aaKnown RBP0.99□□□□□ -2.25
SMC4-223ENST00000493695 CMTM5Q96DZ9 223 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 SPZ1Q9BXG8 430 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 HDHD2Q9H0R4 259 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 ANAPC10Q9UM13 185 aa0.99□□□□□ -2.25
SMC4-223ENST00000493695 IGHV1-18A0A0C4DH31 117 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 DISC1C4P0D8 188 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 CIAO1O76071 339 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 YEATS4O95619 227 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 REG1AP05451 166 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 SERPINA7P05543 415 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 LGALS1P09382 135 aaKnown RBP0.98□□□□□ -2.25
SMC4-223ENST00000493695 COX5BP10606 129 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 PSMB8P28062 276 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 CCR2P41597 374 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 TPI1P60174 286 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 TMEM258P61165 79 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 MLLT11Q13015 90 aaPredicted RBP0.98□□□□□ -2.25
SMC4-223ENST00000493695 PPP1R1AQ13522 171 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 RASSF6Q6ZTQ3 369 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 SLC7A6Q92536 515 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 RETNLBQ9BQ08 111 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 MAP1LC3AQ9H492 121 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 XAGE1AQ9HD64 81 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms