RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MRPL54Q6P161 138 aaKnown RBP9.79□□□□□ -0.84
HDAC4-210ENST00000493582 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 FAM58AQ8N1B3 248 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 ZNF596Q8TC21 504 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-210ENST00000493582 DLL3Q9NYJ7 618 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 PRUNE2Q8WUY3 3088 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 TRAV9-1A0A075B6T8 112 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 A0A1W2PPC4 97 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 ZNF891A8MT65 544 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-210ENST00000493582 C5orf67F2Z3F1 127 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 BMPR1BO00238 502 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 LINC01565O15544 149 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 CD1BP29016 333 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 LINC00205P59089 165 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 RPL30P62888 115 aaKnown RBP9.79□□□□□ -0.84
HDAC4-210ENST00000493582 MPV17L2Q567V2 206 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 CLEC2AQ6UVW9 174 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 ZNF808Q8N4W9 903 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-210ENST00000493582 RNASE7Q9H1E1 156 aaKnown RBP9.79□□□□□ -0.84
HDAC4-210ENST00000493582 OR2D2Q9H210 308 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 IGHV1OR21-1A0A087WYE8 117 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 SAA2-SAA4A0A096LPE2 208 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 LRP5LA4QPB2 252 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 OR2T8A6NH00 312 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 OR5B21A6NL26 309 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 DUSP3P51452 185 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-210ENST00000493582 DCAF12Q5T6F0 453 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 DOLPP1Q86YN1 238 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 MUC15Q8N387 334 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 NEUROG1Q92886 237 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 BADQ92934 168 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 EAF1Q96JC9 268 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-210ENST00000493582 ZIC3O60481 467 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 FKBP2P26885 142 aaKnown RBP9.78□□□□□ -0.84
HDAC4-210ENST00000493582 VWC2Q2TAL6 325 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 ZNF439Q8NDP4 499 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 DEFB126Q9BYW3 111 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 TRAPPC2LQ9UL33 140 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 TMEM238C9JI98 176 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 CELA2AP08217 269 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 CA6P23280 308 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 ARF1P84077 181 aaKnown RBP9.78□□□□□ -0.84
HDAC4-210ENST00000493582 CEACAM21Q3KPI0 293 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 TMEM240Q5SV17 173 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 ASPHD1Q5U4P2 390 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 C9orf135Q5VTT2 229 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 MIC13Q5XKP0 118 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 OR4A47Q6IF82 309 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 RAB1CQ92928 201 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 SPSB4Q96A44 273 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 CLEC1BQ9P126 229 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 CDC42EP3Q9UKI2 254 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 NBEAQ8NFP9 2946 aa9.78□□□□□ -0.84
HDAC4-210ENST00000493582 CEP290O15078 2479 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 TRAV9-2A0A087WT02 112 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 TRBV9A0A0B4J1U6 114 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 STAG3L2P0CL84 134 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 STAG3L3P0CL85 134 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 CX3CL1P78423 397 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 AMMECR1LQ6DCA0 310 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 AAED1Q7RTV5 226 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 OR5B3Q8NH48 314 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 CPT1CQ8TCG5 803 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 BCL2L2Q92843 193 aaPredicted RBP9.77□□□□□ -0.84
HDAC4-210ENST00000493582 NUDT11Q96G61 164 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 C1QTNF5Q9BXJ0 243 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 WDR83OSQ9Y284 106 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 VPS13AQ96RL7 3174 aa9.77□□□□□ -0.84
HDAC4-210ENST00000493582 RHBDL1O75783 438 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 SRD5A2P31213 254 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 CCR5P51681 352 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 TNXAQ16473 311 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 EBLN2Q6P2I7 272 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 C19orf35Q6ZS72 473 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 PLXDC1Q8IUK5 500 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 PNKDQ8N490 385 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 ZC2HC1AQ96GY0 325 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 RPH3ALQ9UNE2 315 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 R4GN57 208 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 TRBV6-6A0A0A6YYG2 114 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 C17orf98A8MV24 154 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 FOXH1O75593 365 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 RHOGP84095 191 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 PMCHL1Q16048 86 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 SPATA31B1PQ5VZV4 182 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 C17orf82Q86X59 251 aaPredicted RBP9.77□□□□□ -0.85
HDAC4-210ENST00000493582 SSMEM1Q8WWF3 244 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 WASHC3Q9Y3C0 194 aa9.77□□□□□ -0.85
HDAC4-210ENST00000493582 FREM2Q5SZK8 3169 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 C15orf62A8K5M9 175 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 TAX1BP3O14907 124 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 CXorf1O96002 111 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 CCL3P10147 92 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 GABRA2P47869 451 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 BRWD1-AS2P59051 145 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 ARG2P78540 354 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 MRPS21P82921 87 aaKnown RBP9.76□□□□□ -0.85
HDAC4-210ENST00000493582 ZNF718Q3SXZ3 478 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 FREM1Q5H8C1 2179 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms