RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 ADTRPQ96IZ2 230 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 MRPL27Q9P0M9 148 aaKnown RBP10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 KLK9Q9UKQ9 250 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 PKD1P98161 4303 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 A0A0A6YYD4 124 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 NPIPB5A8MRT5 1133 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 TMEM14DPA8MWL7 114 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 WBP4O75554 376 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 CTRB1P17538 263 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 ELLP55199 621 aaPredicted RBP10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 NANOS2P60321 138 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 QRFPP83859 136 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 CDK10Q15131 360 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 SMN1Q16637 294 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 CTRB2Q6GPI1 263 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 CLEC19AQ6UXS0 136 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 CBR4Q8N4T8 237 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 OR4A4PQ8NGN8 299 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 GGHQ92820 318 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 GALNT14Q96FL9 552 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 C5orf66Q9H5L9 145 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 MAP6D1Q9H9H5 199 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 HSF4Q9ULV5 492 aa10.5□□□□□ -0.73
PRPF40A-211ENST00000493468 LOC100130705A0A1B0GUX0 176 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 TRDCB7Z8K6 153 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 TSPAN4O14817 238 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 DIRAS3O95661 229 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 CRYZL1O95825 349 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 BPNT1O95861 308 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 SAA1P0DJI8 122 aaPredicted RBP10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 PSMB6P28072 239 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 MED21Q13503 144 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 MED22Q15528 200 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 CEACAM19Q7Z692 300 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 EEF1AKMT3Q96AZ1 226 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 FBXL17Q9UF56 701 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 CLEC2DQ9UHP7 191 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 APLNQ9ULZ1 77 aa10.49□□□□□ -0.73
PRPF40A-211ENST00000493468 FOXI3A8MTJ6 420 aaPredicted RBP10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 TEX22C9J3V5 150 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 MYOD1P15172 320 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 FCGR2BP31994 310 aaPredicted RBP10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 DUTP33316 252 aaKnown RBP10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 C10orf55Q5SWW7 151 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 UNQ9165/PRO28630Q6UXU0 137 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 FAM89BQ8N5H3 189 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 FANCD2OSQ96PS1 177 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 CABLES2Q9BTV7 478 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 LPAR5Q9H1C0 372 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 UBQLN2Q9UHD9 624 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 UFC1Q9Y3C8 167 aa10.48□□□□□ -0.73
PRPF40A-211ENST00000493468 TRBV7-1A0A0A6YYK4 115 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 SOCS1O15524 211 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 DHFRP00374 187 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 IGHV3-23P01764 117 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 CRYGCP07315 174 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 GSTT2P0CG29 244 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 GSTT2BP0CG30 244 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 CD37P11049 281 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 HIST1H1BP16401 226 aaKnown RBP10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 ZNF585BQ52M93 769 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 PHYHIPQ92561 330 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 FYTTD1Q96QD9 318 aaKnown RBP10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 URM1Q9BTM9 101 aaKnown RBP10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 KCNK15Q9H427 330 aa10.47□□□□□ -0.73
PRPF40A-211ENST00000493468 TRBV6-7A0A0A0MS04 114 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 HMX3A6NHT5 357 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 LINC00473A8K010 186 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 C11orf94C9JXX5 98 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 FABP7O15540 132 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 RPL35AP18077 110 aaKnown RBP10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 LRRTM1Q86UE6 522 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 SETD9Q8NE22 299 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 OR10J5Q8NHC4 309 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 PYDC1Q8WXC3 89 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 TMEM80Q96HE8 168 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 RARRES2Q99969 163 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 CMSS1Q9BQ75 279 aaKnown RBP10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 KRTAP4-5Q9BYR2 181 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 C6orf62Q9GZU0 229 aaPredicted RBP10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 SLC2A9Q9NRM0 540 aa10.46□□□□□ -0.73
PRPF40A-211ENST00000493468 PNMA8CA0A1B0GUJ8 204 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 DPPA5A6NC42 116 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 OR4C46A6NHA9 309 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 S1PR2O95136 353 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 ZNF735P0CB33 412 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 CELP19835 753 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 ADMP35318 185 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 RASSF2P50749 326 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 MFAP2P55001 183 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 TMEM50BP56557 158 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 LAMTOR1Q6IAA8 161 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 C19orf35Q6ZS72 473 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 OR6M1Q8NGM8 313 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 CXorf58Q96LI9 332 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 ZNF436Q9C0F3 470 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms