RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 NOL3O60936 208 aaKnown RBP5.31□□□□□ -1.56
VPS52-219ENST00000493379 PPYP01298 95 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 IGF1P05019 195 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 CRYGBP07316 175 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 IL6RP08887 468 aaPredicted RBP5.31□□□□□ -1.56
VPS52-219ENST00000493379 FGF2P09038 288 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 RRASP10301 218 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 TMEM11P17152 192 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 NFYAP23511 347 aaPredicted RBP5.31□□□□□ -1.56
VPS52-219ENST00000493379 CD24P25063 80 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 GNRHRP30968 328 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 FCGR2CP31995 323 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 RCVRNP35243 200 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 LGALS7P47929 136 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 REG1BP48304 166 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 RFX2P48378 723 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 LUMP51884 338 aaPredicted RBP5.31□□□□□ -1.56
VPS52-219ENST00000493379 TAS2R46P59540 309 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 KRTAP10-3P60369 221 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 NHLH2Q02577 135 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 SRSF4Q08170 494 aaKnown RBP5.31□□□□□ -1.56
VPS52-219ENST00000493379 ZNF66Q6ZN08 573 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 LHFPL1Q86WI0 220 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 TMEM219Q86XT9 240 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 PDPNQ86YL7 162 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 TMEM229BQ8NBD8 167 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 OR4C13Q8NGP0 309 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 OR52I2Q8NH67 350 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 MCFD2Q8NI22 146 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 MRAPQ8TCY5 172 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 SMIM4Q8WVI0 70 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 DEDD2Q8WXF8 326 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 MOB3AQ96BX8 217 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 DIRAS2Q96HU8 199 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 RITA1Q96K30 269 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 HSD17B10Q99714 261 aaKnown RBP5.31□□□□□ -1.56
VPS52-219ENST00000493379 GINS4Q9BRT9 223 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 TNFRSF19Q9NS68 423 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 FAM212BQ9NTI7 297 aaPredicted RBP5.31□□□□□ -1.56
VPS52-219ENST00000493379 KLK11Q9UBX7 282 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 RNF150Q9ULK6 438 aa5.31□□□□□ -1.56
VPS52-219ENST00000493379 KIAA1109Q2LD37 5005 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 IGHV3-72A0A0B4J1Y9 119 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 LINC00473A8K010 186 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 FAM25AB3EWG3 89 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 FAM25CB3EWG5 89 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 FAM25GB3EWG6 89 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 RGS5O15539 181 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 RBFOX2O43251 390 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS52-219ENST00000493379 PAX4O43316 350 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 SPDEFO95238 335 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 TNFRSF6BO95407 300 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 IGLV2-23P01705 113 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 IGKV1-16P04430 117 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 ZNF735P0CB33 412 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 AADACP22760 399 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 HRH1P35367 487 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 GPR12P47775 334 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 THBS3P49746 956 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 LINC00205P59089 165 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 MRGPRG-AS1Q2M3A8 158 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 ACTBL2Q562R1 376 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 AADACL3Q5VUY0 350 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 LIN54Q6MZP7 749 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 LPCAT3Q6P1A2 487 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 ZNF562Q6V9R5 426 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 CCDC28AQ8IWP9 274 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 ARRDC1Q8N5I2 433 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 OR6Q1Q8NGQ2 317 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 OR2T6Q8NHC8 308 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 FCAMRQ8WWV6 532 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 TAF15Q92804 592 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS52-219ENST00000493379 BORCS5Q969J3 196 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 OR2D2Q9H210 308 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 IFT46Q9NQC8 304 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 TAS2R8Q9NYW2 309 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 MRPS7Q9Y2R9 242 aaKnown RBP5.3□□□□□ -1.56
VPS52-219ENST00000493379 WASHC3Q9Y3C0 194 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 V9GYH0 126 aa5.3□□□□□ -1.56
VPS52-219ENST00000493379 ANKRD20A5PA0PJZ0 165 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 MEIS3P1A6NDR6 274 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 FABP12A6NFH5 140 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 SRRM4A7MD48 611 aaKnown RBP5.29□□□□□ -1.56
VPS52-219ENST00000493379 RRHO14718 337 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 NBR2O15453 112 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 BRI3O95415 125 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 HLA-DRB1P01911 266 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 CD3DP04234 171 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 TAS2R19P59542 299 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 ARPC4P59998 168 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 DGCR2P98153 550 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 CFHR3Q02985 330 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 ZNF79Q15937 498 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 POU2AF1Q16633 256 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 C5orf64Q2M2E5 130 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 ABCA11PQ4W5N1 156 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 FAM131AQ6UXB0 335 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 SNX29P2Q8IUI4 249 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 TCTEX1D1Q8N7M0 179 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 TEX45Q8NA69 505 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms