RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 HABP2Q14520 560 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-204ENST00000492741 HNF4GQ14541 408 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 IL17RELQ6ZVW7 336 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 LSM10Q969L4 123 aaKnown RBP17.72■□□□□ 0.43
PSPC1-204ENST00000492741 RHOVQ96L33 236 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 MEGF9Q9H1U4 602 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 PFDN1O60925 122 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 CCNKO75909 580 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 FSHBP01225 129 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 IGKV1-5P01602 117 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 SNRNP70P08621 437 aaKnown RBP17.72■□□□□ 0.43
PSPC1-204ENST00000492741 THOC7Q6I9Y2 204 aaKnown RBP17.72■□□□□ 0.43
PSPC1-204ENST00000492741 AKAP14Q86UN6 197 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 CHAC2Q8WUX2 184 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 ZNF436Q9C0F3 470 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-204ENST00000492741 GSKIPQ9P0R6 139 aa17.72■□□□□ 0.43
PSPC1-204ENST00000492741 MOSP00540 346 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 FAM106CPP0CH98 169 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 HNF1AP20823 631 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 LGALS7P47929 136 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 H2BFSP57053 126 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 IAH1Q2TAA2 248 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-204ENST00000492741 BCL6BQ8N143 479 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-204ENST00000492741 OR2T10Q8NGZ9 312 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 GPR146Q96CH1 333 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 OR10C1Q96KK4 312 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 MMP24Q9Y5R2 645 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 CSPG4Q6UVK1 2322 aa17.71■□□□□ 0.43
PSPC1-204ENST00000492741 SRRM4A7MD48 611 aaKnown RBP17.7■□□□□ 0.42
PSPC1-204ENST00000492741 IZUMO4Q1ZYL8 232 aa17.7■□□□□ 0.42
PSPC1-204ENST00000492741 FAM219AQ8IW50 185 aa17.7■□□□□ 0.42
PSPC1-204ENST00000492741 RITA1Q96K30 269 aa17.7■□□□□ 0.42
PSPC1-204ENST00000492741 SPIN2AQ99865 258 aa17.7■□□□□ 0.42
PSPC1-204ENST00000492741 SPIN2BQ9BPZ2 258 aa17.7■□□□□ 0.42
PSPC1-204ENST00000492741 TMUB1Q9BVT8 246 aa17.7■□□□□ 0.42
PSPC1-204ENST00000492741 RANBP3Q9H6Z4 567 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-204ENST00000492741 OTOGQ6ZRI0 2925 aa17.7■□□□□ 0.42
PSPC1-204ENST00000492741 A0A0G2JRQ6 117 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 RBMXL2O75526 392 aaKnown RBP17.69■□□□□ 0.42
PSPC1-204ENST00000492741 LY6G6DO95868 133 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 NMSQ5H8A3 153 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 C2orf50Q96LR7 162 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 TSNAXQ99598 290 aaKnown RBP17.69■□□□□ 0.42
PSPC1-204ENST00000492741 SSX3Q99909 188 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 TMEM140Q9NV12 185 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 FOSL1P15407 271 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 DEFB112Q30KQ8 113 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 VMA21Q3ZAQ7 101 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 EAF1Q96JC9 268 aaPredicted RBP17.69■□□□□ 0.42
PSPC1-204ENST00000492741 RNF5Q99942 180 aa17.69■□□□□ 0.42
PSPC1-204ENST00000492741 A0A1B0GU03 582 aa17.68■□□□□ 0.42
PSPC1-204ENST00000492741 TMEM11P17152 192 aa17.68■□□□□ 0.42
PSPC1-204ENST00000492741 CYCSP99999 105 aaKnown RBP17.68■□□□□ 0.42
PSPC1-204ENST00000492741 OR4A47Q6IF82 309 aa17.68■□□□□ 0.42
PSPC1-204ENST00000492741 CLEC9AQ6UXN8 241 aa17.68■□□□□ 0.42
PSPC1-204ENST00000492741 RANGRFQ9HD47 186 aaPredicted RBP17.68■□□□□ 0.42
PSPC1-204ENST00000492741 CACNG5Q9UF02 275 aa17.68■□□□□ 0.42
PSPC1-204ENST00000492741 MDFIC2A0A1B0GVS7 189 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 FAM90A9PA6NNJ1 464 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 SAA1P0DJI8 122 aaPredicted RBP17.67■□□□□ 0.42
PSPC1-204ENST00000492741 SMCO1Q147U7 214 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 MMDQ15546 238 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 LRRC75BQ2VPJ9 315 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 THNSL2Q86YJ6 484 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 OR1S1Q8NH92 325 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 VSTM2AQ8TAG5 236 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 ZDHHC16Q969W1 377 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 CYSRT1A8MQ03 144 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 SLC25A17O43808 307 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 SNAPC5O75971 98 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 OR2A4O95047 310 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 GIPP09681 153 aaPredicted RBP17.67■□□□□ 0.42
PSPC1-204ENST00000492741 CNTFRP26992 372 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 PLGLAQ15195 96 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 POU2AF1Q16633 256 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 C9orf139Q6ZV77 190 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 OR4A16Q8NH70 328 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 OR2A7Q96R45 310 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 KIAA1456Q9P272 454 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 NSG2Q9Y328 171 aa17.67■□□□□ 0.42
PSPC1-204ENST00000492741 NCBP2LA6PVI3 153 aaKnown RBP17.66■□□□□ 0.42
PSPC1-204ENST00000492741 DYNLT3P51808 116 aa17.66■□□□□ 0.42
PSPC1-204ENST00000492741 EBI3Q14213 229 aa17.66■□□□□ 0.42
PSPC1-204ENST00000492741 Q6ZRM9 215 aa17.66■□□□□ 0.42
PSPC1-204ENST00000492741 ZBTB8BQ8NAP8 495 aaPredicted RBP17.66■□□□□ 0.42
PSPC1-204ENST00000492741 WDR89Q96FK6 387 aaPredicted RBP17.66■□□□□ 0.42
PSPC1-204ENST00000492741 FYTTD1Q96QD9 318 aaKnown RBP17.66■□□□□ 0.42
PSPC1-204ENST00000492741 NMES1Q9C002 83 aa17.66■□□□□ 0.42
PSPC1-204ENST00000492741 SCGB1D2O95969 90 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 IGLV2-23P01705 113 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 OR9G9P0C7N8 305 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 P0C879 139 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 SLC25A6P12236 298 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 F2RL1P55085 397 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 UBE2KP61086 200 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 PSG5Q15238 335 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 NEURL2Q9BR09 285 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-204ENST00000492741 ACANP16112 2415 aa17.65■□□□□ 0.42
PSPC1-204ENST00000492741 H3BUX3 64 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms