RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 F2RL1P55085 397 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 SCAND1P57086 179 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 TAS2R43P59537 309 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 SLC22A6Q4U2R8 563 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 MORN2Q502X0 79 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 NKAPLQ5M9Q1 402 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 RNLSQ5VYX0 342 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 DMKNQ6E0U4 476 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-212ENST00000492407 FAM71F2Q6NXP2 309 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 TCTE3Q8IZS6 198 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 SVOPQ8N4V2 548 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF491Q8N8L2 437 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 NPBQ8NG41 125 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 OR11H1Q8NG94 326 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 OR1N2Q8NGR9 330 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 GLYATL2Q8WU03 294 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 CCDC107Q8WV48 283 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 GHSRQ92847 366 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 DUX3Q96PT4 197 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 HSPB9Q9BQS6 159 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 AKIP1Q9NQ31 210 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 FAM212BQ9NTI7 297 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-212ENST00000492407 KCNIP1Q9NZI2 227 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF581Q9P0T4 197 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 JPT1Q9UK76 154 aa7.12□□□□□ -1.27
HDAC3-212ENST00000492407 TRBV5-7A0A0A0MS05 114 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF736B4DX44 427 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-212ENST00000492407 YPEL1O60688 119 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
HDAC3-212ENST00000492407 UCP1P25874 307 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 CRIP2P52943 208 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-212ENST00000492407 RPS11P62280 158 aaKnown RBP eCLIP7.11□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF616Q08AN1 781 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 KIAA0141Q14154 515 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-212ENST00000492407 DOC2BQ14184 412 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 MMDQ15546 238 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF260Q3ZCT1 412 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 FAM27D1Q5T7N8 215 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 OR2G6Q5TZ20 316 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 XAF1Q6GPH4 301 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 LPCAT3Q6P1A2 487 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 GLIPR1L1Q6UWM5 242 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 LYPD6Q86Y78 171 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 TCTEX1D1Q8N7M0 179 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 GDPD1Q8N9F7 314 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 YPEL2Q96QA6 119 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 RNF5Q99942 180 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 FAM110AQ9BQ89 295 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 CST11Q9H112 138 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 OR51J1Q9H342 316 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 TAF9BQ9HBM6 251 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 OR2S2Q9NQN1 319 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 PGPEP1Q9NXJ5 209 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 SSR3Q9UNL2 185 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 MRPS28Q9Y2Q9 187 aaKnown RBP7.11□□□□□ -1.27
HDAC3-212ENST00000492407 TNFRSF18Q9Y5U5 241 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 PEX16Q9Y5Y5 336 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 SMAD5-AS1Q9Y6J3 95 aa7.11□□□□□ -1.27
HDAC3-212ENST00000492407 IGHV3-43A0A0B4J1X8 118 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 TEX13DA0A0J9YY54 714 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-212ENST00000492407 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-212ENST00000492407 NBR2O15453 112 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 NDUFA3O95167 84 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 UBBP0CG47 229 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 IGHV3-43DP0DP04 118 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 MGMTP16455 207 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 RCC1P18754 421 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-212ENST00000492407 ANXA7P20073 488 aaKnown RBP7.1□□□□□ -1.27
HDAC3-212ENST00000492407 S100A11P31949 105 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 RAB9AP51151 201 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 PKIAP61925 76 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 GUCA2BQ16661 112 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 DEFB136Q30KP8 78 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 TTC23Q5W5X9 447 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF660Q6AZW8 331 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF833PQ6ZTB9 187 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 PQLC1Q8N2U9 271 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 JAGN1Q8N5M9 183 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF485Q8NCK3 441 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 OR1L1Q8NH94 360 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 TCTEX1D2Q8WW35 142 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 GALMQ96C23 342 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 SMIM12Q96EX1 92 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 ST6GAL2Q96JF0 529 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 PGLYRP3Q96LB9 341 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 CNBD2Q96M20 576 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 Q96M66 194 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 PRR25Q96S07 402 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 ABHD14AQ9BUJ0 271 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 NXF2Q9GZY0 626 aaKnown RBP7.1□□□□□ -1.27
HDAC3-212ENST00000492407 HIPK2Q9H2X6 1198 aa7.1□□□□□ -1.27
HDAC3-212ENST00000492407 TRAV8-7A0A075B6U6 113 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 IGHV7-81A0A0B4J1V7 117 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 TRAV41A0A0B4J266 112 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 A0A1B0GV72 72 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 A0A1W2PP11 408 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 HELTA6NFD8 242 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 PDCD6O75340 191 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms