RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 THBS3P49746 956 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 PXDC1Q5TGL8 231 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 OR13D1Q8NGV5 346 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 ST8SIA2Q92186 375 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 ST6GALNAC6Q969X2 333 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 CLEC7AQ9BXN2 247 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 NUP50Q9UKX7 468 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 AUP1Q9Y679 476 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 LINC00862A6NCI5 91 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 GPR37O15354 613 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 TXNL1O43396 289 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 SYNGR2O43760 224 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 ARG1P05089 322 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 HNF4GQ14541 408 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 MSMO1Q15800 293 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 HLA-DRB5Q30154 266 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 VMO1Q7Z5L0 202 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 TGIF2LXQ8IUE1 241 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 OR2C3Q8N628 320 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 OR4S2Q8NH73 311 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 C8orf46Q8TAG6 207 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 RAB39BQ96DA2 213 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 RBKSQ9H477 322 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 C11orf1Q9H5F2 150 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 PLEKHA2Q9HB19 425 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 ABCA2Q9BZC7 2435 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 TNCP24821 2201 aa11.29□□□□□ -0.6
SMPD4-219ENST00000491128 IGHV3OR16-10A0A075B7F0 116 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 H0YJW9 148 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 IGLV1-47P01700 117 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 NQO2P16083 231 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 UBE2KP61086 200 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 EWSR1Q01844 656 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMPD4-219ENST00000491128 SPANXN5Q5MJ07 72 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-219ENST00000491128 CD300LFQ8TDQ1 290 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 A0A087X0M5 115 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 A0A1B0GX30 115 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 A0A1W2PPH5 198 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 BUB1B-PAK6H3BSN5 160 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 IFNA17P01571 189 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 METTL15P1P0C7V9 234 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 TNFRSF9Q07011 255 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 LRRC20Q8TCA0 184 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 NABP2Q9BQ15 211 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 HINT2Q9BX68 163 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 GAB2Q9UQC2 676 aa11.28□□□□□ -0.6
SMPD4-219ENST00000491128 FBXO24O75426 580 aa11.27□□□□□ -0.6
SMPD4-219ENST00000491128 CNTFRP26992 372 aa11.27□□□□□ -0.6
SMPD4-219ENST00000491128 HCP5Q6MZN7 132 aa11.27□□□□□ -0.6
SMPD4-219ENST00000491128 CLEC2AQ6UVW9 174 aa11.27□□□□□ -0.6
SMPD4-219ENST00000491128 TMEM252Q8N6L7 170 aa11.27□□□□□ -0.6
SMPD4-219ENST00000491128 C10orf105Q8TEF2 133 aa11.27□□□□□ -0.6
SMPD4-219ENST00000491128 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.27□□□□□ -0.6
SMPD4-219ENST00000491128 TRIM77I1YAP6 450 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 P2RY1P47900 373 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 ERVK-16P61578 105 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 TMEM30BQ3MIR4 351 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 FBLN7Q53RD9 439 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-219ENST00000491128 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 HARBI1Q96MB7 349 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 PIMREGQ9BSJ6 248 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 PSENENQ9NZ42 101 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 UBQLN2Q9UHD9 624 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 ITPR2Q14571 2701 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 PLXNB1O43157 2135 aa11.27□□□□□ -0.61
SMPD4-219ENST00000491128 CTRB1P17538 263 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 PVALBP20472 110 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-219ENST00000491128 C4BPBP20851 252 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 CTRB2Q6GPI1 263 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 TMEM186Q96B77 213 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 TPSG1Q9NRR2 321 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 LYRM2Q9NU23 88 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-219ENST00000491128 ABCA1O95477 2261 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 hCG_1809904A0A1W2PP81 198 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 A0A1W2PPE2 198 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 A0A1W2PR64 198 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 A0A1W2PRV1 198 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 CEBPZOSA8MTT3 80 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 RNASEK-C17orf49H0YIS7 233 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 GPR137BO60478 399 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 SAA1P0DJI8 122 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-219ENST00000491128 PRRX1P54821 245 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 RELBQ01201 579 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 PAX2Q02962 417 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 ARL16Q0P5N6 197 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 LINC00311Q8N616 119 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 OR5AN1Q8NGI8 311 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 OR5C1Q8NGR4 320 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 TNFRSF14Q92956 283 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 INSIG2Q9Y5U4 225 aa11.26□□□□□ -0.61
SMPD4-219ENST00000491128 IFNA7P01567 189 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 SLC25A6P12236 298 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 RAB13P51153 203 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms