RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 RBM14Q96PK6 669 aaKnown RBP12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 WNK1Q9H4A3 2382 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 RGS13O14921 159 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 PATZ1Q9HBE1 687 aaKnown RBP12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 NPDC1Q9NQX5 325 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 TCF19Q9Y242 345 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 WSB1Q9Y6I7 421 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 PCDH15Q96QU1 1955 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
ARHGEF39-205ENST00000490638 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 WISP1O95388 367 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 IGKV1D-33P01593 117 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 IGKV1-33P01594 117 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 IGKV3-15P01624 115 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 TFPI2P48307 235 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 GUCA2BQ16661 112 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 FAM215AQ9Y5M1 114 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 RANBP2P49792 3224 aaKnown RBP12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 SIGLEC5O15389 551 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 RND2P52198 227 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 PAX5Q02548 391 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 PSG5Q15238 335 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 HIST3H3Q16695 136 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 C5orf66Q9H5L9 145 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 GAB2Q9UQC2 676 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 E7EQL1 145 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 CHEK1O14757 476 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 TNFSF13O75888 250 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 PLAUP00749 431 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 PRB1P04280 392 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 REG1AP05451 166 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 CD1BP29016 333 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 UCP3P55916 312 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 TMEM252Q8N6L7 170 aa12.07□□□□□ -0.48
ARHGEF39-205ENST00000490638 C5orf63A6NC05 138 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 DBX1A6NMT0 343 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 NPIPB11E5RHQ5 1161 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 HTN1P15515 57 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 OR10J1P30954 320 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 COMPP49747 757 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 KIAA0141Q14154 515 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 OR4C12Q96R67 309 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 SNRPCP09234 159 aaKnown RBP12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 PLA2G5P39877 138 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 HGFACQ04756 655 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 C10orf113Q5VZT2 155 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 OSR1Q8TAX0 266 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 CTDSP1Q9GZU7 261 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 PPP5D1E7EU14 171 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 HYPMO75409 117 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 MELTFP08582 738 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 GUK1Q16774 197 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 SLC35E3Q7Z769 313 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 OR11H7Q8NGC8 314 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 EAF1Q96JC9 268 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 TMEM133Q9H2Q1 129 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 TMEM167BQ9NRX6 74 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 NAGKQ9UJ70 344 aa12.06□□□□□ -0.48
ARHGEF39-205ENST00000490638 C7orf66A4D0T2 115 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 J3QRE1 110 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 MFAP4P55083 255 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 RTN4RL2Q86UN3 420 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 TMEM178BH3BS89 294 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 IGHV3-48P01763 117 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 ACAA1P09110 424 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 UQCRFS1P47985 274 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 NHLH2Q02577 135 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 NUP37Q8NFH4 326 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 ANGPTL6Q8NI99 470 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 LSM10Q969L4 123 aaKnown RBP12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 IGKV1-12A0A0C4DH73 117 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 SERTM2A0A1B0GWG4 89 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 IGKV1D-12P01611 117 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 SMIM17P0DL12 118 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 CD24P25063 80 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 FAM106AQ4KMX7 169 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 NECAP1Q8NC96 275 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 MRPL30Q8TCC3 161 aaKnown RBP12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 CABLES2Q9BTV7 478 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 TRAV24A0A0B4J272 114 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 B4DSR2 109 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 RAB4AP20338 218 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 SELENOTP62341 195 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 RBPMS2Q6ZRY4 209 aaKnown RBP12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 STXBP6Q8NFX7 210 aa12.05□□□□□ -0.48
ARHGEF39-205ENST00000490638 PF4P02776 101 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 WDR25Q64LD2 544 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 FAM169BQ8N8A8 192 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 ZNF524Q96C55 264 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 SLX1AQ9BQ83 275 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 PNRC2Q9NPJ4 139 aaKnown RBP12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 J3KRW8 73 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 CD74P04233 296 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 GALR1P47211 349 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 ANKRD55Q3KP44 614 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms