RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MEIKINA0A087WXM9 373 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 HMSDA8MTL9 139 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 F8W036 122 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 K7ERQ8 282 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 NIPSNAP2O75323 286 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 SERPINA7P05543 415 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 RPSAP08865 295 aaKnown RBP0.75□□□□□ -2.29
CCDC39-206ENST00000489868 RD3LP0DJH9 198 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 CXCL3P19876 107 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 KDELR2P33947 212 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 MAP3K7CLP57077 242 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 TBPL1P62380 186 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 TPM4P67936 248 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 BTN3A2P78410 334 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 MRPS15P82914 257 aaKnown RBP0.75□□□□□ -2.29
CCDC39-206ENST00000489868 COTL1Q14019 142 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 GNA13Q14344 377 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 ZNHIT3Q15649 155 aaPredicted RBP0.75□□□□□ -2.29
CCDC39-206ENST00000489868 MIAQ16674 131 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 PDPK2PQ6A1A2 396 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 ZNF705AQ6ZN79 300 aaPredicted RBP0.75□□□□□ -2.29
CCDC39-206ENST00000489868 GPHB5Q86YW7 130 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 OR13C8Q8NGS7 320 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 ANKRD7Q92527 254 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 SLC7A6Q92536 515 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 MS4A6EQ96DS6 147 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 LLPHQ9BRT6 129 aaKnown RBP0.75□□□□□ -2.29
CCDC39-206ENST00000489868 PSTPIP2Q9H939 334 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 SPACA1Q9HBV2 294 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 CD300AQ9UGN4 299 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 ATPIF1Q9UII2 106 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 PRELID1Q9Y255 219 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 ATP6V1DQ9Y5K8 247 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 SIPA1L1O43166 1804 aa0.75□□□□□ -2.29
CCDC39-206ENST00000489868 EVC2Q86UK5 1308 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 A0A0D9SEW6 157 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 MKRN2OSH3BPM6 223 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 AZIN1O14977 448 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 SULT1B1O43704 296 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 CA5AP35218 305 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 HAAOP46952 286 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 MYL6P60660 151 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 UBE2IP63279 158 aaKnown RBP0.74□□□□□ -2.29
CCDC39-206ENST00000489868 BASP1P80723 227 aaKnown RBP0.74□□□□□ -2.29
CCDC39-206ENST00000489868 DR1Q01658 176 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 EMX1Q04741 257 aaPredicted RBP0.74□□□□□ -2.29
CCDC39-206ENST00000489868 ANGPT1Q15389 498 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 CLEC12BQ2HXU8 276 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 FAM45BPQ6NSW5 357 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 C8orf74Q6P047 294 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 NAA40Q86UY6 237 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 ZNF565Q8N9K5 539 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 OR10D3Q8NH80 312 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 CDC26Q8NHZ8 85 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 ZNF514Q96K75 400 aaPredicted RBP0.74□□□□□ -2.29
CCDC39-206ENST00000489868 ODF3Q96PU9 254 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 BBS2Q9BXC9 721 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 METTL9Q9H1A3 318 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 TREM1Q9NP99 234 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 C22orf24Q9Y442 160 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 HEATR5BQ9P2D3 2071 aa0.74□□□□□ -2.29
CCDC39-206ENST00000489868 TMED7-TICAM2A0A0A6YYA0 188 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 DAPL1A0PJW8 107 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 IQCF5A8MTL0 148 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 C9JCJ5 164 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 SMLR1H3BR10 107 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 H3BT86 120 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 ATP5HO75947 161 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 OR5F1O95221 314 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 LGALS1P09382 135 aaKnown RBP0.73□□□□□ -2.29
CCDC39-206ENST00000489868 LINC00614P0C842 121 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 MIPP30301 263 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 PPP1R2P41236 205 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 RPL28P46779 137 aaKnown RBP0.73□□□□□ -2.29
CCDC39-206ENST00000489868 GTF2A1P52655 376 aaPredicted RBP0.73□□□□□ -2.29
CCDC39-206ENST00000489868 ARPC4P59998 168 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 TPI1P60174 286 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 ITGB3BPQ13352 177 aaPredicted RBP0.73□□□□□ -2.29
CCDC39-206ENST00000489868 SNCBQ16143 134 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 ARHGAP11BQ3KRB8 267 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 SAPCD1Q5SSQ6 148 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 PTRHD1Q6GMV3 140 aaKnown RBP0.73□□□□□ -2.29
CCDC39-206ENST00000489868 PPP1R2P3Q6NXS1 205 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 FAM173BQ6P4H8 233 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 STX12Q86Y82 276 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 BOD1L2Q8IYS8 172 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 MBD3L1Q8WWY6 194 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 PPP1R14BQ96C90 147 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 CHMP6Q96FZ7 201 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 UPF3BQ9BZI7 483 aaKnown RBP0.73□□□□□ -2.29
CCDC39-206ENST00000489868 NDEL1Q9GZM8 345 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 MED9Q9NWA0 146 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 PCYT1BQ9Y5K3 369 aaPredicted RBP0.73□□□□□ -2.29
CCDC39-206ENST00000489868 CACNA1BQ00975 2339 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 PTPRSQ13332 1948 aa0.73□□□□□ -2.29
CCDC39-206ENST00000489868 DICER1Q9UPY3 1922 aaKnown RBP0.73□□□□□ -2.29
CCDC39-206ENST00000489868 TRAV7A0A075B6U4 112 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 TRPC5OSA6NMA1 111 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 GOLGA6L19H0YKK7 550 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 GOLGA8MH3BSY2 632 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms