RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 MED22Q15528 200 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 C2orf76Q3KRA6 126 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 LIPKQ5VXJ0 399 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 SLC16A13Q7RTY0 426 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 PACRGLQ8N7B6 248 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 FAM3DQ96BQ1 224 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 ADTRPQ96IZ2 230 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 SPIN2AQ99865 258 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 SPIN2BQ9BPZ2 258 aa12.72□□□□□ -0.37
TOP3B-217ENST00000489581 LSM2Q9Y333 95 aaKnown RBP12.72□□□□□ -0.37
TOP3B-217ENST00000489581 CXorf65A6NEN9 183 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 HMX3A6NHT5 357 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 PTGES3LE9PB15 166 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 DENRO43583 198 aaKnown RBP12.71□□□□□ -0.37
TOP3B-217ENST00000489581 IGHV3-23P01764 117 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 CBLN1P23435 193 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 TMEM91Q6ZNR0 172 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 C19orf35Q6ZS72 473 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 TMEM61Q8N0U2 210 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 OSR1Q8TAX0 266 aaPredicted RBP12.71□□□□□ -0.37
TOP3B-217ENST00000489581 GINS4Q9BRT9 223 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 GGTLC1Q9BX51 225 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 C8orf4Q9NR00 106 aa12.71□□□□□ -0.37
TOP3B-217ENST00000489581 KMT2AQ03164 3969 aa12.71□□□□□ -0.38
TOP3B-217ENST00000489581 TMEM272A0A1B0GTI8 110 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 J3QRK9 145 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 LGALS9O00182 355 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 CDK10Q15131 360 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 ZNF57Q68EA5 555 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-217ENST00000489581 SLC25A42Q86VD7 318 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 MMD2Q8IY49 270 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 OR52B4Q8NGK2 314 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 UFD1Q92890 307 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 RAB3CQ96E17 227 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 DCUN1D5Q9BTE7 237 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 FBXL7Q9UJT9 491 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 S4R3C0 116 aa12.7□□□□□ -0.38
TOP3B-217ENST00000489581 A0A075B6Q4 140 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 LOC102724200A0A096LPH7 203 aaPredicted RBP12.69□□□□□ -0.38
TOP3B-217ENST00000489581 ZNF320A2RRD8 509 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 CREBL2O60519 120 aaPredicted RBP12.69□□□□□ -0.38
TOP3B-217ENST00000489581 FCGR3BO75015 233 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 SCAF4O95104 1147 aaKnown RBP12.69□□□□□ -0.38
TOP3B-217ENST00000489581 GNB3P16520 340 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 RPS25P62851 125 aaKnown RBP12.69□□□□□ -0.38
TOP3B-217ENST00000489581 EWSR1Q01844 656 aaKnown RBP eCLIP12.69□□□□□ -0.38
TOP3B-217ENST00000489581 FAM209BQ5JX69 171 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 CLEC19AQ6UXS0 136 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 GPHB5Q86YW7 130 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 MLXQ9UH92 298 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 RAB22AQ9UL26 194 aa12.69□□□□□ -0.38
TOP3B-217ENST00000489581 A0A0J9YWU9 116 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 DIRAS3O95661 229 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 ARL3P36405 182 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 TM4SF20Q53R12 229 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 HES5Q5TA89 166 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 H1FOOQ8IZA3 346 aaPredicted RBP12.68□□□□□ -0.38
TOP3B-217ENST00000489581 VKORC1L1Q8N0U8 176 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 UXS1Q8NBZ7 420 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 CCDC140Q96MF4 163 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 ZNF257Q9Y2Q1 563 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 V9GY05 133 aa12.68□□□□□ -0.38
TOP3B-217ENST00000489581 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 TMEM213A2RRL7 107 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 NUPR2A6NF83 97 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 TEX22C9J3V5 150 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 E7EUB6 86 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 ARL6IP5O75915 188 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 NDUFB8O95169 186 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 IL6RP08887 468 aaPredicted RBP12.67□□□□□ -0.38
TOP3B-217ENST00000489581 HSMCR30P0CW71 290 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 CALRP27797 417 aaKnown RBP12.67□□□□□ -0.38
TOP3B-217ENST00000489581 FAM106AQ4KMX7 169 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 OR2B11Q5JQS5 317 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 FYTTD1Q96QD9 318 aaKnown RBP12.67□□□□□ -0.38
TOP3B-217ENST00000489581 OR51E2Q9H255 320 aa12.67□□□□□ -0.38
TOP3B-217ENST00000489581 DPPA5A6NC42 116 aa12.66□□□□□ -0.38
TOP3B-217ENST00000489581 RPL30P62888 115 aaKnown RBP12.66□□□□□ -0.38
TOP3B-217ENST00000489581 ANKRD55Q3KP44 614 aa12.66□□□□□ -0.38
TOP3B-217ENST00000489581 CEMP1Q6PRD7 247 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-217ENST00000489581 BTNL8Q6UX41 500 aa12.66□□□□□ -0.38
TOP3B-217ENST00000489581 OR10R2Q8NGX6 335 aa12.66□□□□□ -0.38
TOP3B-217ENST00000489581 FANCD2OSQ96PS1 177 aa12.66□□□□□ -0.38
TOP3B-217ENST00000489581 NPIPB5A8MRT5 1133 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 MFNGO00587 321 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 HIST1H1DP16402 221 aaKnown RBP12.65□□□□□ -0.38
TOP3B-217ENST00000489581 GADD45AP24522 165 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 TALDO1P37837 337 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 RPL27AP46776 148 aaKnown RBP12.65□□□□□ -0.38
TOP3B-217ENST00000489581 ARFRP1Q13795 201 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 IRF3Q14653 427 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 KCTD9Q7L273 389 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 LYG2Q86SG7 212 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 RPP25LQ8N5L8 163 aaKnown RBP12.65□□□□□ -0.38
TOP3B-217ENST00000489581 ZNF645Q8N7E2 425 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
TOP3B-217ENST00000489581 A0A1B0GW64 132 aa12.64□□□□□ -0.39
TOP3B-217ENST00000489581 A8MWP6 167 aa12.64□□□□□ -0.39
TOP3B-217ENST00000489581 RAB27BO00194 218 aa12.64□□□□□ -0.39
TOP3B-217ENST00000489581 AREGP15514 252 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms