RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 ANKRD55Q3KP44 614 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 ZNF585BQ52M93 769 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 ZNF767PQ75MW2 155 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 SLC35D1Q9NTN3 355 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 WASHC3Q9Y3C0 194 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 NF1P21359 2839 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 C7orf66A4D0T2 115 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 RTL8BQ17RB0 113 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 OR2T10Q8NGZ9 312 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 OR5R1Q8NH85 324 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 MITD1Q8WV92 249 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 MED28Q9H204 178 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 OR51J1Q9H342 316 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 DNAJC9-AS1A6NH13 148 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 FAM90A9PA6NNJ1 464 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 SNRPGP15A8MWD9 76 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 SSNA1O43805 119 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 CRYZL1O95825 349 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 TMEM11P17152 192 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 UCP1P25874 307 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 LPAR6P43657 344 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 TAGLNQ01995 201 aaKnown RBP11.41□□□□□ -0.58
CLDN11-209ENST00000489485 TMEM219Q86XT9 240 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 LHFPL5Q8TAF8 219 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 EAF1Q96JC9 268 aaPredicted RBP11.41□□□□□ -0.58
CLDN11-209ENST00000489485 PHB2Q99623 299 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 PITPNC1Q9UKF7 332 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 TCF19Q9Y242 345 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 POMT1Q9Y6A1 747 aa11.41□□□□□ -0.58
CLDN11-209ENST00000489485 B3GALNT1O75752 331 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 CDS2O95674 445 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 MOSP00540 346 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 HILS1P60008 231 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 FBLN7Q53RD9 439 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 THNSL2Q86YJ6 484 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 PDPNQ86YL7 162 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 ZNF695Q8IW36 515 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 C12orf45Q8N5I9 185 aaPredicted RBP11.4□□□□□ -0.58
CLDN11-209ENST00000489485 TCTEX1D1Q8N7M0 179 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 COQ8AQ8NI60 647 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 CD300LFQ8TDQ1 290 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.58
CLDN11-209ENST00000489485 JMJD8Q96S16 334 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 CHIAQ9BZP6 476 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 RANBP3Q9H6Z4 567 aaPredicted RBP11.4□□□□□ -0.58
CLDN11-209ENST00000489485 ESM1Q9NQ30 184 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 PLSCR3Q9NRY6 295 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
CLDN11-209ENST00000489485 TCF21O43680 179 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 S1PR2O95136 353 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 IGKV1-39P01597 117 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 IGKV1D-39P04432 117 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 RRASP10301 218 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 RPA2P15927 270 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 KIR2DS2P43631 304 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 TMEM268Q5VZI3 342 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 OR4C13Q8NGP0 309 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 OR4S2Q8NH73 311 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 RITA1Q96K30 269 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 TMEM56Q96MV1 263 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 TMEM56-RWDD3S4R434 201 aa11.4□□□□□ -0.59
CLDN11-209ENST00000489485 RBFOX2O43251 390 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLDN11-209ENST00000489485 HPRT1P00492 218 aa11.39□□□□□ -0.59
CLDN11-209ENST00000489485 KRASP01116 189 aa11.39□□□□□ -0.59
CLDN11-209ENST00000489485 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
CLDN11-209ENST00000489485 EBI3Q14213 229 aa11.39□□□□□ -0.59
CLDN11-209ENST00000489485 LYZL2Q7Z4W2 148 aa11.39□□□□□ -0.59
CLDN11-209ENST00000489485 SELENOHQ8IZQ5 122 aaKnown RBP11.39□□□□□ -0.59
CLDN11-209ENST00000489485 VKORC1L1Q8N0U8 176 aa11.39□□□□□ -0.59
CLDN11-209ENST00000489485 LGI3Q8N145 548 aa11.39□□□□□ -0.59
CLDN11-209ENST00000489485 TMEM86BQ8N661 226 aa11.39□□□□□ -0.59
CLDN11-209ENST00000489485 SLC35G3Q8N808 338 aa11.39□□□□□ -0.59
CLDN11-209ENST00000489485 NCBP2LA6PVI3 153 aaKnown RBP11.38□□□□□ -0.59
CLDN11-209ENST00000489485 SHOXO15266 292 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 HOXB5P09067 269 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 G6PCP35575 357 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 MMDQ15546 238 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 RBPMSQ93062 196 aaKnown RBP11.38□□□□□ -0.59
CLDN11-209ENST00000489485 SLC25A33Q9BSK2 321 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 PLEKHA2Q9HB19 425 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 FAM212BQ9NTI7 297 aaPredicted RBP11.38□□□□□ -0.59
CLDN11-209ENST00000489485 A6NDX4 124 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 ADAP1O75689 374 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 F2RL1P55085 397 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 SRPXP78539 464 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 DHRS7BQ6IAN0 325 aaPredicted RBP11.38□□□□□ -0.59
CLDN11-209ENST00000489485 SSX9Q7RTT3 188 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 LURAP1LQ8IV03 231 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 HARBI1Q96MB7 349 aa11.38□□□□□ -0.59
CLDN11-209ENST00000489485 TNCP24821 2201 aa11.37□□□□□ -0.59
CLDN11-209ENST00000489485 DBX1A6NMT0 343 aa11.37□□□□□ -0.59
CLDN11-209ENST00000489485 MARCH11A6NNE9 402 aa11.37□□□□□ -0.59
CLDN11-209ENST00000489485 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
CLDN11-209ENST00000489485 CNTFRP26992 372 aa11.37□□□□□ -0.59
CLDN11-209ENST00000489485 AKR1C2P52895 323 aa11.37□□□□□ -0.59
CLDN11-209ENST00000489485 C2orf68Q2NKX9 166 aa11.37□□□□□ -0.59
CLDN11-209ENST00000489485 LRTM2Q8N967 370 aa11.37□□□□□ -0.59
CLDN11-209ENST00000489485 DMBX1Q8NFW5 382 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms