RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 K7EPK0 472 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 CD1BP29016 333 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 NKX2-1P43699 371 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-206ENST00000489131 LGALS7P47929 136 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 REG1BP48304 166 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 ERVK-16P61578 105 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 EBI3Q14213 229 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 H2BFWTQ7Z2G1 175 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 ZNF429Q86V71 674 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 PUSL1Q8N0Z8 303 aaKnown RBP10.35□□□□□ -0.75
TOP3A-206ENST00000489131 FAM71E2Q8N5Q1 922 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 OR52E5Q8NH55 327 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 OR4A5Q8NH83 315 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 THAP6Q8TBB0 222 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 FLYWCH2Q96CP2 140 aaKnown RBP10.35□□□□□ -0.75
TOP3A-206ENST00000489131 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-206ENST00000489131 BET1LQ9NYM9 111 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 GSKIPQ9P0R6 139 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 HSPB7Q9UBY9 170 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 TNFSF18Q9UNG2 199 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 RCL1Q9Y2P8 373 aaKnown RBP10.35□□□□□ -0.75
TOP3A-206ENST00000489131 AUP1Q9Y679 476 aa10.35□□□□□ -0.75
TOP3A-206ENST00000489131 PRRC2AP48634 2157 aaKnown RBP10.35□□□□□ -0.75
TOP3A-206ENST00000489131 CR1P17927 2039 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 IGHV1-69DA0A0B4J2H0 117 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 IGLV2-23P01705 113 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 IGHV1-69P01742 117 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 IGHV4-31P0DP07 118 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 BPIFB3P59826 476 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 TMEM249Q2WGJ8 235 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 RNASE11Q8TAA1 199 aaKnown RBP10.34□□□□□ -0.75
TOP3A-206ENST00000489131 TMEM140Q9NV12 185 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 HIF1ANQ9NWT6 349 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 MBD2Q9UBB5 411 aa10.34□□□□□ -0.75
TOP3A-206ENST00000489131 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.76
TOP3A-206ENST00000489131 RNF222A6NCQ9 220 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 SRRM4A7MD48 611 aaKnown RBP10.33□□□□□ -0.76
TOP3A-206ENST00000489131 E5RGE8 158 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 NPFFO15130 113 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 OR2F2O95006 317 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 SPDEFO95238 335 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 LY86O95711 162 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 RLN2P04090 185 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 NKX2-5P52952 324 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-206ENST00000489131 TAS2R30P59541 319 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 UBE2KP61086 200 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 RELBQ01201 579 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 PRB3Q04118 309 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-206ENST00000489131 OR2F1Q13607 317 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 LGALSLQ3ZCW2 172 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-206ENST00000489131 LRRC37A5PQ49AS3 106 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 CXorf66Q5JRM2 361 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-206ENST00000489131 OR4A47Q6IF82 309 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 LHFPL4Q7Z7J7 247 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 ZNF546Q86UE3 836 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 DMBX1Q8NFW5 382 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 OR1S1Q8NH92 325 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 AQP10Q96PS8 301 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 MS4A7Q9GZW8 240 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-206ENST00000489131 TMEM14BQ9NUH8 114 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 OR5AC2Q9NZP5 309 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 FOXA2Q9Y261 457 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-206ENST00000489131 ZNF257Q9Y2Q1 563 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 NSG2Q9Y328 171 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 NBPF19A0A087WUL8 3843 aa10.33□□□□□ -0.76
TOP3A-206ENST00000489131 FXYD6-FXYD2A0A087WZ82 144 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 C15orf61A6NNL5 157 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 H7C2Y5 167 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 UPK2O00526 184 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 TIMM23O14925 209 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 SHOXO15266 292 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 VENTXO95231 258 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 FSHBP01225 129 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 CRYGBP07316 175 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 OR9G9P0C7N8 305 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 CXCL2P19875 107 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 SAA4P35542 130 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 P2RY1P47900 373 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 DYNLT3P51808 116 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 LGALS4P56470 323 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 TNFRSF9Q07011 255 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 IZUMO4Q1ZYL8 232 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 ACOT7LQ6ZUV0 252 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 THNSL2Q86YJ6 484 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 TEX45Q8NA69 505 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 TMEM167AQ8TBQ9 72 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 HARBI1Q96MB7 349 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 RAB40CQ96S21 281 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 C7orf69Q9H7B7 122 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 WSB1Q9Y6I7 421 aa10.32□□□□□ -0.76
TOP3A-206ENST00000489131 A0A0D9SG52 128 aa10.31□□□□□ -0.76
TOP3A-206ENST00000489131 ARPC5O15511 151 aa10.31□□□□□ -0.76
TOP3A-206ENST00000489131 SYNGR2O43760 224 aa10.31□□□□□ -0.76
TOP3A-206ENST00000489131 MED6O75586 246 aa10.31□□□□□ -0.76
TOP3A-206ENST00000489131 KBTBD11O94819 623 aa10.31□□□□□ -0.76
TOP3A-206ENST00000489131 SAA1P0DJI8 122 aaPredicted RBP10.31□□□□□ -0.76
TOP3A-206ENST00000489131 S100A10P60903 97 aa10.31□□□□□ -0.76
TOP3A-206ENST00000489131 GPR157Q5UAW9 335 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms