RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 DIMT1Q9UNQ2 313 aaKnown RBP11.94□□□□□ -0.5
USP48-210ENST00000489108 TMEM14DPA8MWL7 114 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 TRDCB7Z8K6 153 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 C8orf88P0DMB2 117 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 SRMP19623 302 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
USP48-210ENST00000489108 QRFPP83859 136 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 RBMS2Q15434 407 aaKnown RBP11.93□□□□□ -0.5
USP48-210ENST00000489108 C1orf100Q5SVJ3 147 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 GLT8D1Q68CQ7 371 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 CEACAM19Q7Z692 300 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 SLC25A42Q86VD7 318 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 C11orf45Q8TAV5 145 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 C2CD4CQ8TF44 421 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 LPAR5Q9H1C0 372 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 ZNF257Q9Y2Q1 563 aa11.93□□□□□ -0.5
USP48-210ENST00000489108 XRCC3O43542 346 aa11.92□□□□□ -0.5
USP48-210ENST00000489108 CELP19835 753 aa11.92□□□□□ -0.5
USP48-210ENST00000489108 TMEM50BP56557 158 aa11.92□□□□□ -0.5
USP48-210ENST00000489108 FANCD2OSQ96PS1 177 aa11.92□□□□□ -0.5
USP48-210ENST00000489108 CMSS1Q9BQ75 279 aaKnown RBP11.92□□□□□ -0.5
USP48-210ENST00000489108 MFFQ9GZY8 342 aa11.92□□□□□ -0.5
USP48-210ENST00000489108 MAP6D1Q9H9H5 199 aa11.92□□□□□ -0.5
USP48-210ENST00000489108 C12orf4Q9NQ89 552 aa11.92□□□□□ -0.5
USP48-210ENST00000489108 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
USP48-210ENST00000489108 IRGMA1A4Y4 181 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 LINC00473A8K010 186 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 TEX22C9J3V5 150 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 BET1O15155 118 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 S1PR2O95136 353 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 SAA1P0DJI8 122 aaPredicted RBP11.91□□□□□ -0.5
USP48-210ENST00000489108 SERPINB10P48595 397 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 TCTAP57738 103 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 TPBGQ13641 420 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 INSL4Q14641 139 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 CDK10Q15131 360 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 ODF3L2Q3SX64 289 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 IGSF11Q5DX21 431 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 LRRTM1Q86UE6 522 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 MMD2Q8IY49 270 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 FAM89BQ8N5H3 189 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
USP48-210ENST00000489108 MARC2Q969Z3 335 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 TMEM80Q96HE8 168 aa11.91□□□□□ -0.5
USP48-210ENST00000489108 SPAG8Q99932 426 aaPredicted RBP11.91□□□□□ -0.5
USP48-210ENST00000489108 MRPL27Q9P0M9 148 aaKnown RBP11.91□□□□□ -0.5
USP48-210ENST00000489108 DNAH11Q96DT5 4516 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 E7EUB6 86 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 CLEC3BP05452 202 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 IL6RP08887 468 aaPredicted RBP11.9□□□□□ -0.5
USP48-210ENST00000489108 MAPK3P27361 379 aaPredicted RBP11.9□□□□□ -0.5
USP48-210ENST00000489108 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.5
USP48-210ENST00000489108 OR4A4PQ8NGN8 299 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 OR5B3Q8NH48 314 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 EEF1AKMT3Q96AZ1 226 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 GALNT14Q96FL9 552 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 ARHGAP5-AS1Q96IT6 56 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 ADTRPQ96IZ2 230 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 RARRES2Q99969 163 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 C5orf66Q9H5L9 145 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 HSF4Q9ULV5 492 aa11.9□□□□□ -0.5
USP48-210ENST00000489108 IGHV3-35A0A0C4DH35 117 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 DPPA5A6NC42 116 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 FOXI3A8MTJ6 420 aaPredicted RBP11.89□□□□□ -0.51
USP48-210ENST00000489108 IGLL5B9A064 214 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 FABP7O15540 132 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 CREBL2O60519 120 aaPredicted RBP11.89□□□□□ -0.51
USP48-210ENST00000489108 CD1AP06126 327 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 TAS2R43P59537 309 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 MED21Q13503 144 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 GVQW1Q8N7I0 195 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 OR10J5Q8NHC4 309 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 FYTTD1Q96QD9 318 aaKnown RBP11.89□□□□□ -0.51
USP48-210ENST00000489108 DCUN1D5Q9BTE7 237 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 URM1Q9BTM9 101 aaKnown RBP11.89□□□□□ -0.51
USP48-210ENST00000489108 PECRQ9BY49 303 aa11.89□□□□□ -0.51
USP48-210ENST00000489108 RBM7Q9Y580 266 aaKnown RBP11.89□□□□□ -0.51
USP48-210ENST00000489108 TSPAN4O14817 238 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 BPNT1O95861 308 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 GSTT2P0CG29 244 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 GSTT2BP0CG30 244 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 GALP22466 123 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 MED22Q15528 200 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 ACSM3Q53FZ2 586 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 RBM48Q5RL73 367 aaKnown RBP11.88□□□□□ -0.51
USP48-210ENST00000489108 TTC23Q5W5X9 447 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 OR6M1Q8NGM8 313 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 CSTL1Q9H114 145 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 SLC2A9Q9NRM0 540 aa11.88□□□□□ -0.51
USP48-210ENST00000489108 TRBV6-7A0A0A0MS04 114 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 A0A1B0GW64 132 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 MFSD2BA6NFX1 497 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 DEFB4AO15263 64 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 FCGR3BO75015 233 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 CIB2O75838 187 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 CRYGCP07315 174 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 CD37P11049 281 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 AREGP15514 252 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms