RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 DYRK1AQ13627 763 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 KPRPQ5T749 579 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-218ENST00000489037 REC114Q7Z4M0 266 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 TMEM17Q86X19 198 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 OR6F1Q8NGZ6 308 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 VSTM2AQ8TAG5 236 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 P2RX4Q99571 388 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 BCL7BQ9BQE9 202 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 ZNF2Q9BSG1 426 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-218ENST00000489037 SLA2Q9H6Q3 261 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 ADAM30Q9UKF2 790 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 ANAPC10Q9UM13 185 aa11.14□□□□□ -0.63
BRCA1-218ENST00000489037 ARPC1BO15143 372 aaKnown RBP11.13□□□□□ -0.63
BRCA1-218ENST00000489037 MPPED1O15442 326 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 RGS5O15539 181 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 TNFSF12O43508 249 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 HLA-DMAP28067 261 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 RCVRNP35243 200 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 TMBIM6P55061 237 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 TSPAN5P62079 268 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 TNXAQ16473 311 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 PRSS8Q16651 343 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 C19orf54Q5BKX5 351 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 DHRS11Q6UWP2 260 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 MMD2Q8IY49 270 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 POC5Q8NA72 575 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 MYOZ3Q8TDC0 251 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 EXTL2Q9UBQ6 330 aa11.13□□□□□ -0.63
BRCA1-218ENST00000489037 ZMAT5Q9UDW3 170 aaKnown RBP11.13□□□□□ -0.63
BRCA1-218ENST00000489037 H3BUA1 57 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 TPPPO94811 219 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 TRGV3P03979 118 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 OR8U8P0C7N1 319 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 SAA1P0DJI8 122 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-218ENST00000489037 S100GP29377 79 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 HRH1P35367 487 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 TPPP2P59282 170 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 FOXB2Q5VYV0 432 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 IDO2Q6ZQW0 420 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 CMTM1Q8IZ96 169 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 SPAG16Q8N0X2 631 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 OR5T1Q8NG75 326 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 OR1N2Q8NGR9 330 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 OR5B12Q96R08 314 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 GNB4Q9HAV0 340 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 SCOCQ9UIL1 159 aa11.12□□□□□ -0.63
BRCA1-218ENST00000489037 SOX15O60248 233 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 OR2A4O95047 310 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 RUNX1Q01196 453 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 ZNF616Q08AN1 781 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 EIF4EBP1Q13541 118 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-218ENST00000489037 SPCS2Q15005 226 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 AADACL3Q5VUY0 350 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 LPCAT3Q6P1A2 487 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 ZNF818PQ6ZRF7 136 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 CD300LFQ8TDQ1 290 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 MOB3AQ96BX8 217 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 OR2A7Q96R45 310 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
BRCA1-218ENST00000489037 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 A0A0G2JLM5 398 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 C13orf42A0A1B0GVH6 325 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 MSGN1A6NI15 193 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 I3L521 148 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.63
BRCA1-218ENST00000489037 IFNA6P05013 189 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 KIAA0141Q14154 515 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-218ENST00000489037 LYSMD2Q8IV50 215 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 OR51H1Q8NH63 302 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 FCAMRQ8WWV6 532 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 SRSF12Q8WXF0 261 aaKnown RBP11.1□□□□□ -0.63
BRCA1-218ENST00000489037 RHOVQ96L33 236 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 GPHA2Q96T91 129 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 ZNF430Q9H8G1 570 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-218ENST00000489037 COA4Q9NYJ1 87 aa11.1□□□□□ -0.63
BRCA1-218ENST00000489037 GPR31O00270 319 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 KBTBD11O94819 623 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 HPRT1P00492 218 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
BRCA1-218ENST00000489037 GNRHRP30968 328 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 MAS1LP35410 378 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 RNASE12Q5GAN4 147 aaKnown RBP11.09□□□□□ -0.63
BRCA1-218ENST00000489037 C9orf66Q5T8R8 295 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 SSX9Q7RTT3 188 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 SLC25A42Q86VD7 318 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 VKORC1L1Q8N0U8 176 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 TMEM167AQ8TBQ9 72 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
BRCA1-218ENST00000489037 RABL2AQ9UBK7 228 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-218ENST00000489037 RABL2BQ9UNT1 228 aa11.09□□□□□ -0.63
BRCA1-218ENST00000489037 DPPA5A6NC42 116 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms