RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SLC17A3O00476 420 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 BCL2L11O43521 198 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 HLA-DQA1P01909 254 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 CSN2P05814 226 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 SMIM10L2AP0DMW4 78 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 SMIM10L2BP0DMW5 78 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 RPS4Y1P22090 263 aaKnown RBP2.27□□□□□ -2.05
PRPF4-203ENST00000488937 S100A1P23297 94 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 G6PCP35575 357 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 AKR1C3P42330 323 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 DEFA1P59665 94 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 GNB2P62879 340 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 SYCNQ0VAF6 134 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 NDUFA5Q16718 116 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 SMIM21Q3B7S5 101 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 KLHL12Q53G59 568 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 WDR86Q86TI4 376 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 KRTAP7-1Q8IUC3 87 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 CLVS1Q8IUQ0 354 aaPredicted RBP2.27□□□□□ -2.05
PRPF4-203ENST00000488937 EXOC3-AS1Q8N2X6 119 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 FAM24BQ8N5W8 94 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 NUP35Q8NFH5 326 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 OR4D11Q8NGI4 311 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 ZNF675Q8TD23 568 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 SLC7A6Q92536 515 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 CMBLQ96DG6 245 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 L3HYPDHQ96EM0 354 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 NARS2Q96I59 477 aaKnown RBP2.27□□□□□ -2.05
PRPF4-203ENST00000488937 IGF2BP2-AS1Q96M15 143 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 CCDC115Q96NT0 180 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 GPR82Q96P67 336 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 HSPB9Q9BQS6 159 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 C1orf50Q9BV19 199 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 FAM96AQ9H5X1 160 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 KCNIP2Q9NS61 270 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 PRSS21Q9Y6M0 314 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.27□□□□□ -2.05
PRPF4-203ENST00000488937 NUP214P35658 2090 aaPredicted RBP2.27□□□□□ -2.05
PRPF4-203ENST00000488937 TNS2Q63HR2 1409 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 CD109Q6YHK3 1445 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 ABCC12Q96J65 1359 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 TRBV19A0A075B6N1 114 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 TMEM269A0A1B0GVZ9 245 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 RFPL4AA6NLU0 287 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 RFPL4AL1F8VTS6 287 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 K7EP13 123 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 PIRO00625 290 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 COX7A2LO14548 114 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 GSTZ1O43708 216 aaPredicted RBP2.26□□□□□ -2.05
PRPF4-203ENST00000488937 GADD45GO95257 159 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 NDUFC2O95298 119 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 CXorf1O96002 111 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 GYPCP04921 128 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 HLA-DQB2P05538 268 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 CD7P09564 240 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 CGB3P0DN86 165 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 CGB7P0DN87 165 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 PPIBP23284 216 aaKnown RBP2.26□□□□□ -2.05
PRPF4-203ENST00000488937 BLVRBP30043 206 aaPredicted RBP2.26□□□□□ -2.05
PRPF4-203ENST00000488937 CCR6P51684 374 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 ZNF140P52738 457 aaPredicted RBP2.26□□□□□ -2.05
PRPF4-203ENST00000488937 TPI1P60174 286 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 IGLV3-21P80748 117 aaPredicted RBP2.26□□□□□ -2.05
PRPF4-203ENST00000488937 ZFAND6Q6FIF0 208 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 Q6ZS49 121 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 TCF24Q7RTU0 167 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 LINC01551Q86U37 167 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 GPHB5Q86YW7 130 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 BAP18Q8IXM2 172 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 OR9Q1Q8NGQ5 310 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 OR4A5Q8NH83 315 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 GPR119Q8TDV5 335 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 LMX1AQ8TE12 382 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 THEM6Q8WUY1 208 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 OR5P3Q8WZ94 311 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 MALSU1Q96EH3 234 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 CAPZA3Q96KX2 299 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 TRIB3Q96RU7 358 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 NMNAT3Q96T66 252 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 PYGO2Q9BRQ0 406 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 SHANK2-AS3Q9BTD1 123 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 TMEM70Q9BUB7 260 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 TSSK6Q9BXA6 273 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 C1QTNF6Q9BXI9 259 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 GFRA4Q9GZZ7 299 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 RNF122Q9H9V4 155 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 CXorf21Q9HAI6 301 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 TPT1P8Q9HAU6 139 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 FAM60AQ9NP50 221 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 GPR84Q9NQS5 396 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 ZNF230Q9UIE0 474 aaPredicted RBP2.26□□□□□ -2.05
PRPF4-203ENST00000488937 DNAJC12Q9UKB3 198 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 KLK5Q9Y337 293 aaPredicted RBP2.26□□□□□ -2.05
PRPF4-203ENST00000488937 NUP210LQ5VU65 1888 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 NUP210Q8TEM1 1887 aaPredicted RBP2.26□□□□□ -2.05
PRPF4-203ENST00000488937 SPEF2Q9C093 1822 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 AGRNO00468 2067 aa2.26□□□□□ -2.05
PRPF4-203ENST00000488937 PTPRTO14522 1441 aa2.25□□□□□ -2.05
PRPF4-203ENST00000488937 RIMS1Q86UR5 1692 aaKnown RBP2.25□□□□□ -2.05
PRPF4-203ENST00000488937 MYH11P35749 1972 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms