RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ECI1P42126 302 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 CBX5P45973 191 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 NCS1P62166 190 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 EIF4EBP1Q13541 118 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-215ENST00000488494 CDK10Q15131 360 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 TMEM69Q5SWH9 247 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 SRSF12Q8WXF0 261 aaKnown RBP13.7□□□□□ -0.22
ITGB1-215ENST00000488494 DLX4Q92988 240 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-215ENST00000488494 SLC25A46Q96AG3 418 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 S100A16Q96FQ6 103 aaKnown RBP13.7□□□□□ -0.22
ITGB1-215ENST00000488494 PRR25Q96S07 402 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 GPHA2Q96T91 129 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 ZNF430Q9H8G1 570 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-215ENST00000488494 C13orf42A0A1B0GVH6 325 aa13.69□□□□□ -0.22
ITGB1-215ENST00000488494 CREBL2O60519 120 aaPredicted RBP13.69□□□□□ -0.22
ITGB1-215ENST00000488494 PPYP01298 95 aa13.69□□□□□ -0.22
ITGB1-215ENST00000488494 TAS2R20P59543 309 aa13.69□□□□□ -0.22
ITGB1-215ENST00000488494 VKORC1L1Q8N0U8 176 aa13.69□□□□□ -0.22
ITGB1-215ENST00000488494 RHOVQ96L33 236 aa13.69□□□□□ -0.22
ITGB1-215ENST00000488494 COA4Q9NYJ1 87 aa13.69□□□□□ -0.22
ITGB1-215ENST00000488494 MSGN1A6NI15 193 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 MPPED1O15442 326 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 TNFSF12O43508 249 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 SMIM18P0DKX4 95 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 FXYD4P59646 89 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 VBP1P61758 197 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
ITGB1-215ENST00000488494 C10orf55Q5SWW7 151 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 ZNF66Q6ZN08 573 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 OR5AP2Q8NGF4 316 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 TMEM68Q96MH6 324 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 TINAGL1Q9GZM7 467 aaPredicted RBP13.68□□□□□ -0.22
ITGB1-215ENST00000488494 CCL28Q9NRJ3 127 aa13.68□□□□□ -0.22
ITGB1-215ENST00000488494 SAP30O75446 220 aa13.67□□□□□ -0.22
ITGB1-215ENST00000488494 ACTL6BO94805 426 aa13.67□□□□□ -0.22
ITGB1-215ENST00000488494 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
ITGB1-215ENST00000488494 INSL3P51460 131 aa13.67□□□□□ -0.22
ITGB1-215ENST00000488494 TMEM17Q86X19 198 aa13.67□□□□□ -0.22
ITGB1-215ENST00000488494 MMD2Q8IY49 270 aa13.67□□□□□ -0.22
ITGB1-215ENST00000488494 MFSD4AQ8N468 514 aa13.67□□□□□ -0.22
ITGB1-215ENST00000488494 ADAD2Q8NCV1 583 aaKnown RBP13.67□□□□□ -0.22
ITGB1-215ENST00000488494 KCTD12Q96CX2 325 aaKnown RBP13.67□□□□□ -0.22
ITGB1-215ENST00000488494 SLC5A7Q9GZV3 580 aa13.67□□□□□ -0.22
ITGB1-215ENST00000488494 ZNF256Q9Y2P7 627 aaPredicted RBP13.67□□□□□ -0.22
ITGB1-215ENST00000488494 A0A0G2JLM5 398 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 ANKRD34BA5PLL1 514 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 KBTBD11O94819 623 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 LY86O95711 162 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 EIF4EP06730 217 aaKnown RBP13.66□□□□□ -0.22
ITGB1-215ENST00000488494 OR9G9P0C7N8 305 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 BRWD1-AS2P59051 145 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 CD69Q07108 199 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 MSMO1Q15800 293 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 ZNF429Q86V71 674 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 EHFQ9NZC4 300 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 ANAPC10Q9UM13 185 aa13.66□□□□□ -0.22
ITGB1-215ENST00000488494 OR2A4O95047 310 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 BRI3O95415 125 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 KIR2DS2P43631 304 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 HERV-K104P61576 105 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 DYRK1AQ13627 763 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 VSTM2AQ8TAG5 236 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 OR2A7Q96R45 310 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 SPIN2AQ99865 258 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 B9D2Q9BPU9 175 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 SPIN2BQ9BPZ2 258 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 COMMD3Q9UBI1 195 aa13.65□□□□□ -0.22
ITGB1-215ENST00000488494 SULT1C2O00338 296 aa13.64□□□□□ -0.23
ITGB1-215ENST00000488494 RBMXL2O75526 392 aaKnown RBP13.64□□□□□ -0.23
ITGB1-215ENST00000488494 PRH1P02810 166 aa13.64□□□□□ -0.23
ITGB1-215ENST00000488494 C11orf87Q6NUJ2 197 aa13.64□□□□□ -0.23
ITGB1-215ENST00000488494 ACSM6Q6P461 480 aa13.64□□□□□ -0.23
ITGB1-215ENST00000488494 ZNF818PQ6ZRF7 136 aa13.64□□□□□ -0.23
ITGB1-215ENST00000488494 SSX9Q7RTT3 188 aa13.64□□□□□ -0.23
ITGB1-215ENST00000488494 PUSL1Q8N0Z8 303 aaKnown RBP13.64□□□□□ -0.23
ITGB1-215ENST00000488494 NAA50Q9GZZ1 169 aaKnown RBP13.64□□□□□ -0.23
ITGB1-215ENST00000488494 DNAH9Q9NYC9 4486 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 GABARAPO95166 117 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 PMP2P02689 132 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 ZP3P21754 424 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 PRSS3P35030 304 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 TAS2R46P59540 309 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 CATR1Q13166 79 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 SPAG16Q8N0X2 631 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 ZBTB34Q8NCN2 500 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 OR5H2Q8NGV7 314 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 OR51H1Q8NH63 302 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 TMEM167AQ8TBQ9 72 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 GIMAP1Q8WWP7 306 aa13.63□□□□□ -0.23
ITGB1-215ENST00000488494 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
ITGB1-215ENST00000488494 HMX3A6NHT5 357 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 TEX22C9J3V5 150 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 HRASP01112 189 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 TRBV12-3P01733 135 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 APOA1P02647 267 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 RPL27AP46776 148 aaKnown RBP13.62□□□□□ -0.23
ITGB1-215ENST00000488494 RFX2P48378 723 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 RHOGP84095 191 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 ZNF45Q02386 682 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 EXOSC2Q13868 293 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms