RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
PKD1-220ENST00000487932 MMP16P51512 607 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 WDR82Q6UXN9 313 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 COLCA1Q6ZS62 124 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 PPP1R27Q86WC6 154 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 SCARF2Q96GP6 870 aaPredicted RBP13.12□□□□□ -0.31
PKD1-220ENST00000487932 LRRC3BQ96PB8 259 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 TRAV12-3A0A0B4J271 114 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 CRPP02741 224 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 C8orf88P0DMB2 117 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 CNTFRP26992 372 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 CRYBA2P53672 197 aa13.12□□□□□ -0.31
PKD1-220ENST00000487932 TMEM186Q96B77 213 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 MARCH11A6NNE9 402 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 SRIP30626 198 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 HSPE1P61604 102 aaKnown RBP13.11□□□□□ -0.31
PKD1-220ENST00000487932 TCRBV4S1A1TA0A5B7 111 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 SIGLEC5O15389 551 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 PTP4A3O75365 173 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 PKIAP61925 76 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 SELENOHQ8IZQ5 122 aaKnown RBP13.11□□□□□ -0.31
PKD1-220ENST00000487932 OR5AN1Q8NGI8 311 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 ELOVL5Q9NYP7 299 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 CD160O95971 181 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 NPBWR2P48146 333 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 BSPH1Q075Z2 132 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 OR10S1Q8NGN2 331 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 SAP25Q8TEE9 199 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 C1QL1O75973 258 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 COX6A1P12074 109 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 ZP4Q12836 540 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 TNFSF18Q9UNG2 199 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 PLCH1Q4KWH8 1693 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 DOCK2Q92608 1830 aa13.11□□□□□ -0.31
PKD1-220ENST00000487932 SOD3P08294 240 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 ASAH2BP0C7U1 165 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 LY6DQ14210 128 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 C1orf53Q5VUE5 145 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 OR10AG1Q8NH19 301 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 RRHO14718 337 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 FGF5P12034 268 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 ERASQ7Z444 233 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 GTSCR1Q86UQ5 136 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 ABHD17AQ96GS6 310 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 WNT10AQ9GZT5 417 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 HS3ST3B1Q9Y662 390 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 FAM71F2Q6NXP2 309 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.31
PKD1-220ENST00000487932 TRAF4Q9BUZ4 470 aaPredicted RBP13.1□□□□□ -0.31
PKD1-220ENST00000487932 RBMY1BA6NDE4 496 aaKnown RBP13.1□□□□□ -0.31
PKD1-220ENST00000487932 RBMY1EA6NEQ0 496 aaKnown RBP13.1□□□□□ -0.31
PKD1-220ENST00000487932 RBMY1DP0C7P1 496 aaKnown RBP13.1□□□□□ -0.31
PKD1-220ENST00000487932 SEC11BP0C7V7 166 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 RBMY1A1P0DJD3 496 aaKnown RBP13.1□□□□□ -0.31
PKD1-220ENST00000487932 RBMY1CP0DJD4 496 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 RARRES2Q99969 163 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 TMEM106BQ9NUM4 274 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 V9GYH0 126 aa13.1□□□□□ -0.31
PKD1-220ENST00000487932 A0A1W2PQM1 296 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 H7C1H1 209 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 SRD5A1P18405 259 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 SERF2P84101 59 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 MIXL1Q9H2W2 232 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 TRGC2P03986 189 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 MESP2Q0VG99 397 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 FAM209BQ5JX69 171 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 LDLRAD2Q5SZI1 272 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 TMEM252Q8N6L7 170 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 CLDND2Q8NHS1 167 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 SPSB4Q96A44 273 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 TRPM6Q9BX84 2022 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 TMEM222Q9H0R3 208 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 MRPL16Q9NX20 251 aaKnown RBP13.09□□□□□ -0.31
PKD1-220ENST00000487932 KCNE5Q9UJ90 142 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 NDUFA3O95167 84 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
PKD1-220ENST00000487932 A0A1W2PPC1 479 aa13.08□□□□□ -0.31
PKD1-220ENST00000487932 ZNF729A6NN14 1252 aaPredicted RBP13.08□□□□□ -0.31
PKD1-220ENST00000487932 TMEM42Q69YG0 159 aa13.08□□□□□ -0.31
PKD1-220ENST00000487932 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
PKD1-220ENST00000487932 TGIF2-C20orf24A0A0A6YYL0 155 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 A0A1B0GV72 72 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.08□□□□□ -0.32
PKD1-220ENST00000487932 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 SNAI2O43623 268 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 PAPPA-AS1Q5QFB9 102 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 C10orf111Q8N326 155 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 JPT1Q9UK76 154 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 NPIPB4C9JG80 1138 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 TNFRSF9Q07011 255 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 GP6Q9HCN6 339 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 JKAMPQ9P055 326 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 ASXL3Q9C0F0 2248 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 A0A0G2JLM5 398 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 SLC25A20O43772 301 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 NABP2Q9BQ15 211 aa13.08□□□□□ -0.32
PKD1-220ENST00000487932 EPOPA6NHQ4 379 aa13.07□□□□□ -0.32
PKD1-220ENST00000487932 H3BRM9 83 aa13.07□□□□□ -0.32
PKD1-220ENST00000487932 PRB4P10163 310 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms