RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 OR51F2Q8NH61 342 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 OR51A7Q8NH64 312 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 CLDND2Q8NHS1 167 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 SPATA3Q8NHX4 192 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 LYPD6BQ8NI32 183 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF502Q8TBZ5 544 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 RNF133Q8WVZ7 376 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 GEMIN6Q8WXD5 167 aaKnown RBP2.47□□□□□ -2.01
GPNMB-212ENST00000487890 CCL17Q92583 94 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 RDH5Q92781 318 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 MYDGFQ969H8 173 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 TMEM54Q969K7 222 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 YIPF5Q969M3 257 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 RNF170Q96K19 258 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 TSPAN32Q96QS1 320 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 RBP7Q96R05 134 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 TSC22D3Q99576 134 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 KCTD14Q9BQ13 255 aaPredicted RBP2.47□□□□□ -2.01
GPNMB-212ENST00000487890 RSG1Q9BU20 258 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 SLC19A3Q9BZV2 496 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 ACTR3CQ9C0K3 210 aaPredicted RBP2.47□□□□□ -2.01
GPNMB-212ENST00000487890 YIPF3Q9GZM5 350 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 NAA50Q9GZZ1 169 aaKnown RBP2.47□□□□□ -2.01
GPNMB-212ENST00000487890 TXNIPQ9H3M7 391 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 HRASLSQ9HDD0 168 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 SAR1AQ9NR31 198 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 TAS2R5Q9NYW4 299 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 KCNIP1Q9NZI2 227 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 SLC22A13Q9Y226 551 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 IGHV3OR16-13A0A075B7E8 117 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 IGKV1D-43A0A0B4J1Z2 117 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 IGHV3-64DA0A0J9YX35 117 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 TMEM213A2RRL7 107 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 B4DSR2 109 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 F8W036 122 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 H0Y980 276 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 K7EN84 100 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 SULT1C2O00338 296 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 CXCR6O00574 342 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 TCAPO15273 167 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 MAGEB4O15481 346 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 TGOLN2O43493 480 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 SGCEO43556 437 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 CCDC22O60826 627 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 MPZL1O95297 269 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 APOC1P02654 83 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 THY1P04216 161 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 MSMBP08118 114 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 TACSTD2P09758 323 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 ASAH2BP0C7U1 165 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 COX4I1P13073 169 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF35P13682 527 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF250P15622 560 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 MPV17P39210 176 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 OR3A4PP47883 348 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 EVX1P49640 407 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 GZMMP51124 257 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 SELENOTP62341 195 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 RAP1AP62834 184 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 TNFAIP6P98066 277 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 PSG4Q00888 419 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 AESQ08117 197 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 KRR1Q13601 381 aaKnown RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 C10orf128Q5T292 105 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 IDNKQ5T6J7 187 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 OTPQ5XKR4 325 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 STUMQ69YW2 141 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF774Q6NX45 483 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 UGT2A3Q6UWM9 527 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 C12orf54Q6X4T0 127 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 LYG2Q86SG7 212 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 CALHM3Q86XJ0 350 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 CALHM1Q8IU99 346 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF584Q8IVC4 421 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 OR5AS1Q8N127 324 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 Q8N402 240 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 TMEM252Q8N6L7 170 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 KLHL30-AS1Q8NEE0 82 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 OR2Z1Q8NG97 314 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 OR11L1Q8NGX0 322 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 SLC25A40Q8TBP6 338 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 RNASEH2CQ8TDP1 164 aaKnown RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF418Q8TF45 676 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 SLC7A6Q92536 515 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 Q96M85 177 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 C1orf147Q96MC9 270 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 HIST1H4GQ99525 98 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 PRSS27Q9BQR3 290 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 OR2H1Q9GZK4 316 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 OR2J1Q9GZK6 312 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 POLR2J2Q9GZM3 115 aaKnown RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 ALX4Q9H161 411 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 POLR2J3Q9H1A7 115 aaKnown RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 ISG20L2Q9H9L3 353 aaKnown RBP2.46□□□□□ -2.02
GPNMB-212ENST00000487890 SIAEQ9HAT2 523 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 CALYQ9NYX4 217 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 USE1Q9NZ43 259 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 Q9UF83 564 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 CDH10Q9Y6N8 788 aa2.46□□□□□ -2.02
GPNMB-212ENST00000487890 IGKV1D-13A0A0B4J2D9 117 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms